Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.82□□□□□ -1.64
NCK1P16333 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.82□□□□□ -1.64
NCK1P16333 OR7M1P-201ENST00000608946 533 ntBASIC4.82□□□□□ -1.64
NCK1P16333 AL359091.2-201ENST00000609303 556 ntBASIC4.82□□□□□ -1.64
NCK1P16333 AL592494.3-201ENST00000609485 464 ntBASIC4.82□□□□□ -1.64
NCK1P16333 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.82□□□□□ -1.64
NCK1P16333 AC022106.2-201ENST00000620114 757 ntBASIC4.82□□□□□ -1.64
NCK1P16333 CU639417.4-201ENST00000623928 207 ntBASIC4.82□□□□□ -1.64
NCK1P16333 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.82□□□□□ -1.64
NCK1P16333 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
NCK1P16333 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NCK1P16333 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NCK1P16333 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NCK1P16333 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NCK1P16333 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NCK1P16333 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NCK1P16333 AC092747.4-201ENST00000620519 1861 ntBASIC4.81□□□□□ -1.64
NCK1P16333 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NCK1P16333 AC104260.2-201ENST00000623551 3497 ntBASIC4.81□□□□□ -1.64
NCK1P16333 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NCK1P16333 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NCK1P16333 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NCK1P16333 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.81□□□□□ -1.64
NCK1P16333 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.81□□□□□ -1.64
NCK1P16333 ZNF652P1-201ENST00000442420 1309 ntBASIC4.81□□□□□ -1.64
NCK1P16333 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NCK1P16333 MIR365B-201ENST00000362317 111 ntBASIC4.81□□□□□ -1.64
NCK1P16333 RN7SKP74-201ENST00000362849 309 ntBASIC4.81□□□□□ -1.64
NCK1P16333 RNA5SP105-201ENST00000391123 113 ntBASIC4.81□□□□□ -1.64
NCK1P16333 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NCK1P16333 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.81□□□□□ -1.64
NCK1P16333 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.81□□□□□ -1.64
NCK1P16333 TNPO1P1-201ENST00000423641 1138 ntBASIC4.81□□□□□ -1.64
NCK1P16333 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.81□□□□□ -1.64
NCK1P16333 AL390119.1-201ENST00000440329 312 ntBASIC4.81□□□□□ -1.64
NCK1P16333 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.81□□□□□ -1.64
NCK1P16333 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.81□□□□□ -1.64
NCK1P16333 AL591473.1-201ENST00000464297 313 ntBASIC4.81□□□□□ -1.64
NCK1P16333 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NCK1P16333 AC105918.1-201ENST00000474399 838 ntBASIC4.81□□□□□ -1.64
NCK1P16333 SIAH1P1-201ENST00000479411 923 ntBASIC4.81□□□□□ -1.64
NCK1P16333 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.81□□□□□ -1.64
NCK1P16333 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.81□□□□□ -1.64
NCK1P16333 RNA5SP249-201ENST00000516127 99 ntBASIC4.81□□□□□ -1.64
NCK1P16333 AC027308.1-201ENST00000517993 110 ntBASIC4.81□□□□□ -1.64
NCK1P16333 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.81□□□□□ -1.64
NCK1P16333 IGKV2-4-201ENST00000523070 340 ntBASIC4.81□□□□□ -1.64
NCK1P16333 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.81□□□□□ -1.64
NCK1P16333 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NCK1P16333 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NCK1P16333 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NCK1P16333 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.81□□□□□ -1.64
NCK1P16333 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.81□□□□□ -1.64
NCK1P16333 AC107958.1-201ENST00000556576 290 ntBASIC4.81□□□□□ -1.64
NCK1P16333 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.81□□□□□ -1.64
NCK1P16333 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.81□□□□□ -1.64
NCK1P16333 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NCK1P16333 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.81□□□□□ -1.64
NCK1P16333 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.81□□□□□ -1.64
NCK1P16333 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.81□□□□□ -1.64
NCK1P16333 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.81□□□□□ -1.64
NCK1P16333 AC007683.2-201ENST00000624681 714 ntBASIC4.81□□□□□ -1.64
NCK1P16333 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.81□□□□□ -1.64
NCK1P16333 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.81□□□□□ -1.64
NCK1P16333 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NCK1P16333 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NCK1P16333 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NCK1P16333 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NCK1P16333 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NCK1P16333 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
NCK1P16333 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NCK1P16333 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NCK1P16333 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NCK1P16333 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NCK1P16333 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NCK1P16333 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NCK1P16333 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NCK1P16333 AC007996.1-201ENST00000620414 2821 ntBASIC4.8□□□□□ -1.64
NCK1P16333 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.8□□□□□ -1.64
NCK1P16333 PCAT14-202ENST00000627127 3935 ntBASIC4.8□□□□□ -1.64
NCK1P16333 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NCK1P16333 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NCK1P16333 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NCK1P16333 RNA5SP335-201ENST00000363817 110 ntBASIC4.8□□□□□ -1.64
NCK1P16333 RNA5SP234-201ENST00000363916 119 ntBASIC4.8□□□□□ -1.64
NCK1P16333 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NCK1P16333 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NCK1P16333 CASKP1-201ENST00000412870 582 ntBASIC4.8□□□□□ -1.64
NCK1P16333 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.8□□□□□ -1.64
NCK1P16333 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NCK1P16333 RPL34P3-201ENST00000421454 338 ntBASIC4.8□□□□□ -1.64
NCK1P16333 SETP10-201ENST00000424368 814 ntBASIC4.8□□□□□ -1.64
NCK1P16333 AC115283.1-201ENST00000427353 400 ntBASIC4.8□□□□□ -1.64
NCK1P16333 COX6CP13-201ENST00000428703 226 ntBASIC4.8□□□□□ -1.64
NCK1P16333 GAPDHP34-201ENST00000432112 823 ntBASIC4.8□□□□□ -1.64
NCK1P16333 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NCK1P16333 RPS29P10-201ENST00000439197 166 ntBASIC4.8□□□□□ -1.64
NCK1P16333 PCNPP2-201ENST00000441651 455 ntBASIC4.8□□□□□ -1.64
NCK1P16333 RANP1-206ENST00000455094 651 ntBASIC4.8□□□□□ -1.64
NCK1P16333 RN7SL51P-201ENST00000468230 285 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms