Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRT3P12035 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRT3P12035 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRT3P12035 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
KRT3P12035 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
KRT3P12035 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
KRT3P12035 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
KRT3P12035 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
KRT3P12035 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
KRT3P12035 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
KRT3P12035 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
KRT3P12035 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.46□□□□□ -1.54
KRT3P12035 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.46□□□□□ -1.54
KRT3P12035 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRT3P12035 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.46□□□□□ -1.54
KRT3P12035 Y_RNA.62-201ENST00000362840 99 ntBASIC5.46□□□□□ -1.54
KRT3P12035 MIR137-201ENST00000385223 102 ntBASIC5.46□□□□□ -1.54
KRT3P12035 RPL21P67-201ENST00000402896 478 ntBASIC5.46□□□□□ -1.54
KRT3P12035 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.46□□□□□ -1.54
KRT3P12035 PTP4A1P1-201ENST00000420539 515 ntBASIC5.46□□□□□ -1.54
KRT3P12035 RPL12P43-201ENST00000420608 499 ntBASIC5.46□□□□□ -1.54
KRT3P12035 RPS4XP16-201ENST00000427198 791 ntBASIC5.46□□□□□ -1.54
KRT3P12035 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
KRT3P12035 AC009238.2-201ENST00000431026 355 ntBASIC5.46□□□□□ -1.54
KRT3P12035 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.46□□□□□ -1.54
KRT3P12035 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.46□□□□□ -1.54
KRT3P12035 AC011225.1-201ENST00000457751 369 ntBASIC5.46□□□□□ -1.54
KRT3P12035 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.46□□□□□ -1.54
KRT3P12035 AC023424.1-201ENST00000496058 459 ntBASIC5.46□□□□□ -1.54
KRT3P12035 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.46□□□□□ -1.54
KRT3P12035 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.46□□□□□ -1.54
KRT3P12035 GTF2F2P1-201ENST00000511083 675 ntBASIC5.46□□□□□ -1.54
KRT3P12035 ATP5LP3-201ENST00000514223 304 ntBASIC5.46□□□□□ -1.54
KRT3P12035 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.46□□□□□ -1.54
KRT3P12035 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.46□□□□□ -1.54
KRT3P12035 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
KRT3P12035 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.46□□□□□ -1.54
KRT3P12035 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.46□□□□□ -1.54
KRT3P12035 AL358913.1-201ENST00000554342 121 ntBASIC5.46□□□□□ -1.54
KRT3P12035 AC127381.1-201ENST00000555979 939 ntBASIC5.46□□□□□ -1.54
KRT3P12035 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRT3P12035 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.46□□□□□ -1.54
KRT3P12035 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
KRT3P12035 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.46□□□□□ -1.54
KRT3P12035 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.46□□□□□ -1.54
KRT3P12035 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.46□□□□□ -1.54
KRT3P12035 AP005131.7-201ENST00000610087 611 ntBASIC5.46□□□□□ -1.54
KRT3P12035 AC020658.4-201ENST00000613987 684 ntBASIC5.46□□□□□ -1.54
KRT3P12035 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.46□□□□□ -1.54
KRT3P12035 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
KRT3P12035 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.54
KRT3P12035 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
KRT3P12035 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRT3P12035 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.46□□□□□ -1.54
KRT3P12035 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
KRT3P12035 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRT3P12035 THAP12P8-201ENST00000447914 2115 ntBASIC5.45□□□□□ -1.54
KRT3P12035 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
KRT3P12035 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
KRT3P12035 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
KRT3P12035 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
KRT3P12035 AC092376.2-201ENST00000622621 4116 ntBASIC5.45□□□□□ -1.54
KRT3P12035 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
KRT3P12035 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
KRT3P12035 MTCO1P15-201ENST00000529569 1526 ntBASIC5.45□□□□□ -1.54
KRT3P12035 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
KRT3P12035 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
KRT3P12035 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
KRT3P12035 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
KRT3P12035 RNU6-891P-201ENST00000384280 111 ntBASIC5.45□□□□□ -1.54
KRT3P12035 MIR600-201ENST00000385007 98 ntBASIC5.45□□□□□ -1.54
KRT3P12035 SNORA11.3-201ENST00000408471 128 ntBASIC5.45□□□□□ -1.54
KRT3P12035 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.45□□□□□ -1.54
KRT3P12035 SLC35E1P1-201ENST00000419313 864 ntBASIC5.45□□□□□ -1.54
KRT3P12035 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.45□□□□□ -1.54
KRT3P12035 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.45□□□□□ -1.54
KRT3P12035 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
KRT3P12035 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.45□□□□□ -1.54
KRT3P12035 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.45□□□□□ -1.54
KRT3P12035 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.45□□□□□ -1.54
KRT3P12035 AC016724.1-201ENST00000453215 421 ntBASIC5.45□□□□□ -1.54
KRT3P12035 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.45□□□□□ -1.54
KRT3P12035 RPS4XP1-201ENST00000482189 787 ntBASIC5.45□□□□□ -1.54
KRT3P12035 RPS21P4-201ENST00000487122 248 ntBASIC5.45□□□□□ -1.54
KRT3P12035 MYL12BP2-201ENST00000503948 512 ntBASIC5.45□□□□□ -1.54
KRT3P12035 AC024558.1-201ENST00000505008 528 ntBASIC5.45□□□□□ -1.54
KRT3P12035 RPL7L1P4-201ENST00000513004 707 ntBASIC5.45□□□□□ -1.54
KRT3P12035 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.45□□□□□ -1.54
KRT3P12035 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.45□□□□□ -1.54
KRT3P12035 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
KRT3P12035 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
KRT3P12035 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
KRT3P12035 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
KRT3P12035 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
KRT3P12035 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.45□□□□□ -1.54
KRT3P12035 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.45□□□□□ -1.54
KRT3P12035 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.45□□□□□ -1.54
KRT3P12035 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.45□□□□□ -1.54
KRT3P12035 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.45□□□□□ -1.54
KRT3P12035 SNORA11.6-201ENST00000619030 128 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms