Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 MIR541-201ENST00000401360 84 ntBASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 ERHP2-201ENST00000402323 299 ntBASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 RNU2-16P-201ENST00000410712 136 ntBASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 AL590806.1-201ENST00000415818 853 ntBASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 TAF13P2-201ENST00000416876 286 ntBASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 AL365220.1-201ENST00000432923 399 ntBASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 RN7SL717P-201ENST00000478343 297 ntBASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 AC008945.1-201ENST00000505144 499 ntBASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 HIGD1AP18-201ENST00000520730 278 ntBASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 AHI1-217ENST00000534469 680 ntTSL 3 BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 AC087883.1-201ENST00000551882 391 ntBASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 AC009101.1-201ENST00000568135 242 ntBASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 RNU4-89P-201ENST00000607443 133 ntBASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 AC126118.1-201ENST00000607744 628 ntBASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 OXSM-209ENST00000626005 309 ntTSL 3 BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 AC073488.3-201ENST00000631611 778 ntBASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 LINC01808-202ENST00000641680 1116 ntBASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 PSG10P-201ENST00000501199 1500 ntBASIC8.39□□□□□ -1.07
CSB-PGBD3P0DP91 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 LCOR-201ENST00000286067 4542 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 CR381670.1-201ENST00000624291 1693 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 Y_RNA.41-201ENST00000362646 102 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 SNORD116.1-201ENST00000365628 92 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 RNU6-413P-201ENST00000384115 107 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 GLS-204ENST00000409428 816 ntTSL 2 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 OR3D1P-201ENST00000438288 955 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 HMGN1P36-201ENST00000446623 298 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 VPS25P1-201ENST00000455691 508 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 HSPE1P22-201ENST00000456856 327 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 RPS26P24-201ENST00000497656 331 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 IGHV3-57-201ENST00000520143 280 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 MTCO3P15-201ENST00000526563 574 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 PDCL2P2-201ENST00000533651 189 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 OLR1-210ENST00000544577 924 ntTSL 5 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 PDCD6IPP2-207ENST00000566321 1069 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 ELOCP28-201ENST00000590044 317 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 VN1R90P-201ENST00000595717 726 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 VN1R92P-201ENST00000598511 928 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AL513218.1-201ENST00000606527 391 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 PDCD6IPP1-202ENST00000622242 1064 ntBASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms