Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.56□□□□□ -1.68
FREM3P0C091 RN7SL459P-201ENST00000481078 302 ntBASIC4.56□□□□□ -1.68
FREM3P0C091 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.56□□□□□ -1.68
FREM3P0C091 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.56□□□□□ -1.68
FREM3P0C091 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.56□□□□□ -1.68
FREM3P0C091 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.56□□□□□ -1.68
FREM3P0C091 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.56□□□□□ -1.68
FREM3P0C091 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
FREM3P0C091 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
FREM3P0C091 AC018628.1-201ENST00000624147 3819 ntBASIC4.56□□□□□ -1.68
FREM3P0C091 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.56□□□□□ -1.68
FREM3P0C091 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
FREM3P0C091 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.56□□□□□ -1.68
FREM3P0C091 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
FREM3P0C091 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.56□□□□□ -1.68
FREM3P0C091 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
FREM3P0C091 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
FREM3P0C091 ECM1P2-201ENST00000503354 1577 ntBASIC4.56□□□□□ -1.68
FREM3P0C091 ZNF652P1-201ENST00000442420 1309 ntBASIC4.56□□□□□ -1.68
FREM3P0C091 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.55□□□□□ -1.68
FREM3P0C091 RN7SKP213-201ENST00000410746 298 ntBASIC4.55□□□□□ -1.68
FREM3P0C091 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.55□□□□□ -1.68
FREM3P0C091 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.55□□□□□ -1.68
FREM3P0C091 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.55□□□□□ -1.68
FREM3P0C091 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.55□□□□□ -1.68
FREM3P0C091 AC245028.2-201ENST00000458673 253 ntBASIC4.55□□□□□ -1.68
FREM3P0C091 AC079168.1-201ENST00000458741 345 ntBASIC4.55□□□□□ -1.68
FREM3P0C091 AC010350.1-201ENST00000504908 231 ntBASIC4.55□□□□□ -1.68
FREM3P0C091 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.55□□□□□ -1.68
FREM3P0C091 AC090286.3-201ENST00000573133 187 ntBASIC4.55□□□□□ -1.68
FREM3P0C091 MEMO1P5-201ENST00000604810 406 ntBASIC4.55□□□□□ -1.68
FREM3P0C091 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
FREM3P0C091 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FREM3P0C091 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
FREM3P0C091 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
FREM3P0C091 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FREM3P0C091 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.55□□□□□ -1.68
FREM3P0C091 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
FREM3P0C091 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.55□□□□□ -1.68
FREM3P0C091 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.55□□□□□ -1.68
FREM3P0C091 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
FREM3P0C091 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
FREM3P0C091 RNVU1-6-201ENST00000364688 164 ntBASIC4.55□□□□□ -1.68
FREM3P0C091 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FREM3P0C091 BX119904.3-201ENST00000428194 957 ntBASIC4.55□□□□□ -1.68
FREM3P0C091 AL590399.4-201ENST00000436561 601 ntBASIC4.55□□□□□ -1.68
FREM3P0C091 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.55□□□□□ -1.68
FREM3P0C091 SNRPCP3-201ENST00000474888 476 ntBASIC4.55□□□□□ -1.68
FREM3P0C091 AC022133.1-201ENST00000490961 571 ntBASIC4.55□□□□□ -1.68
FREM3P0C091 AC104971.1-201ENST00000495117 578 ntBASIC4.55□□□□□ -1.68
FREM3P0C091 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.55□□□□□ -1.68
FREM3P0C091 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.55□□□□□ -1.68
FREM3P0C091 AC137768.1-201ENST00000549998 553 ntBASIC4.55□□□□□ -1.68
FREM3P0C091 PCNPP1-201ENST00000552501 511 ntBASIC4.55□□□□□ -1.68
FREM3P0C091 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.55□□□□□ -1.68
FREM3P0C091 AL031320.1-201ENST00000604177 357 ntBASIC4.55□□□□□ -1.68
FREM3P0C091 FAM25E-202ENST00000608562 189 ntBASIC4.55□□□□□ -1.68
FREM3P0C091 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.55□□□□□ -1.68
FREM3P0C091 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.55□□□□□ -1.68
FREM3P0C091 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FREM3P0C091 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.55□□□□□ -1.68
FREM3P0C091 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.55□□□□□ -1.68
FREM3P0C091 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.55□□□□□ -1.68
FREM3P0C091 AC068446.1-201ENST00000556425 1549 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FREM3P0C091 AC023421.1-201ENST00000590535 1785 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
FREM3P0C091 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
FREM3P0C091 RN7SKP153-201ENST00000365026 316 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FREM3P0C091 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FREM3P0C091 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
FREM3P0C091 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.54□□□□□ -1.68
FREM3P0C091 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.54□□□□□ -1.68
FREM3P0C091 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.54□□□□□ -1.68
FREM3P0C091 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.54□□□□□ -1.68
FREM3P0C091 AC011753.3-201ENST00000443436 406 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 AL137845.2-201ENST00000444292 988 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 ENPP7P11-201ENST00000505915 627 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 RNA5SP230-201ENST00000517039 122 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 AC087360.1-201ENST00000518788 616 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.54□□□□□ -1.68
FREM3P0C091 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.54□□□□□ -1.68
FREM3P0C091 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.54□□□□□ -1.68
FREM3P0C091 BNIP3P35-201ENST00000604530 490 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.54□□□□□ -1.68
FREM3P0C091 AL627230.1-201ENST00000613077 211 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 AL591926.8-201ENST00000616876 211 ntBASIC4.54□□□□□ -1.68
FREM3P0C091 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC4.54□□□□□ -1.68
FREM3P0C091 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FREM3P0C091 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
FREM3P0C091 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
FREM3P0C091 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.54□□□□□ -1.68
FREM3P0C091 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
FREM3P0C091 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FREM3P0C091 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FREM3P0C091 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.54□□□□□ -1.68
FREM3P0C091 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FREM3P0C091 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FREM3P0C091 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms