Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.9□□□□□ -1.47
COL2A1P02458 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
COL2A1P02458 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.9□□□□□ -1.47
COL2A1P02458 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.9□□□□□ -1.47
COL2A1P02458 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL2A1P02458 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
COL2A1P02458 AC099654.2-201ENST00000433031 1980 ntBASIC5.89□□□□□ -1.47
COL2A1P02458 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL2A1P02458 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.89□□□□□ -1.47
COL2A1P02458 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL2A1P02458 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL2A1P02458 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
COL2A1P02458 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
COL2A1P02458 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL2A1P02458 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.89□□□□□ -1.47
COL2A1P02458 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
COL2A1P02458 RNA5SP453-201ENST00000362503 119 ntBASIC5.89□□□□□ -1.47
COL2A1P02458 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.89□□□□□ -1.47
COL2A1P02458 RPS27AP6-201ENST00000427962 448 ntBASIC5.89□□□□□ -1.47
COL2A1P02458 COX6CP13-201ENST00000428703 226 ntBASIC5.89□□□□□ -1.47
COL2A1P02458 MTND2P40-201ENST00000436718 841 ntBASIC5.89□□□□□ -1.47
COL2A1P02458 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.89□□□□□ -1.47
COL2A1P02458 AC000111.2-201ENST00000448200 210 ntBASIC5.89□□□□□ -1.47
COL2A1P02458 HMGB1P4-201ENST00000455362 567 ntBASIC5.89□□□□□ -1.47
COL2A1P02458 AL356390.1-201ENST00000455684 397 ntBASIC5.89□□□□□ -1.47
COL2A1P02458 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL2A1P02458 RN7SL604P-201ENST00000492589 296 ntBASIC5.89□□□□□ -1.47
COL2A1P02458 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.89□□□□□ -1.47
COL2A1P02458 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.89□□□□□ -1.47
COL2A1P02458 MORF4L1P3-201ENST00000525966 950 ntBASIC5.89□□□□□ -1.47
COL2A1P02458 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.89□□□□□ -1.47
COL2A1P02458 PARP1P2-201ENST00000556806 195 ntBASIC5.89□□□□□ -1.47
COL2A1P02458 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.89□□□□□ -1.47
COL2A1P02458 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.89□□□□□ -1.47
COL2A1P02458 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL2A1P02458 AC063976.2-201ENST00000425667 3556 ntBASIC5.89□□□□□ -1.47
COL2A1P02458 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL2A1P02458 SAMMSON-226ENST00000642089 1582 ntBASIC5.88□□□□□ -1.47
COL2A1P02458 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL2A1P02458 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.88□□□□□ -1.47
COL2A1P02458 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.88□□□□□ -1.47
COL2A1P02458 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC5.88□□□□□ -1.47
COL2A1P02458 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.88□□□□□ -1.47
COL2A1P02458 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.88□□□□□ -1.47
COL2A1P02458 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.88□□□□□ -1.47
COL2A1P02458 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL2A1P02458 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL2A1P02458 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.88□□□□□ -1.47
COL2A1P02458 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL2A1P02458 RNU2-50P-201ENST00000410494 143 ntBASIC5.88□□□□□ -1.47
COL2A1P02458 CNOT7P1-201ENST00000429006 852 ntBASIC5.88□□□□□ -1.47
COL2A1P02458 AC091180.1-201ENST00000462104 372 ntBASIC5.88□□□□□ -1.47
COL2A1P02458 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
COL2A1P02458 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.88□□□□□ -1.47
COL2A1P02458 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.88□□□□□ -1.47
COL2A1P02458 AP002981.1-201ENST00000517692 975 ntBASIC5.88□□□□□ -1.47
COL2A1P02458 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL2A1P02458 AC233699.1-201ENST00000569955 1168 ntBASIC5.88□□□□□ -1.47
COL2A1P02458 MIR4420-201ENST00000583944 77 ntBASIC5.88□□□□□ -1.47
COL2A1P02458 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.88□□□□□ -1.47
COL2A1P02458 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.88□□□□□ -1.47
COL2A1P02458 AC018695.5-201ENST00000605872 315 ntBASIC5.88□□□□□ -1.47
COL2A1P02458 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.88□□□□□ -1.47
COL2A1P02458 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.88□□□□□ -1.47
COL2A1P02458 AC019193.2-201ENST00000610012 634 ntBASIC5.88□□□□□ -1.47
COL2A1P02458 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.88□□□□□ -1.47
COL2A1P02458 AP003400.6-201ENST00000624698 740 ntBASIC5.88□□□□□ -1.47
COL2A1P02458 AC239868.2-201ENST00000564237 4527 ntBASIC5.88□□□□□ -1.47
COL2A1P02458 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL2A1P02458 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.87□□□□□ -1.47
COL2A1P02458 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
COL2A1P02458 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.87□□□□□ -1.47
COL2A1P02458 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL2A1P02458 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL2A1P02458 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL2A1P02458 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COL2A1P02458 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL2A1P02458 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.87□□□□□ -1.47
COL2A1P02458 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL2A1P02458 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.87□□□□□ -1.47
COL2A1P02458 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.87□□□□□ -1.47
COL2A1P02458 LRRC37BP1-201ENST00000398851 714 ntBASIC5.87□□□□□ -1.47
COL2A1P02458 U3.32-201ENST00000408116 212 ntBASIC5.87□□□□□ -1.47
COL2A1P02458 AC114755.2-201ENST00000413520 361 ntBASIC5.87□□□□□ -1.47
COL2A1P02458 RPL17P36-201ENST00000420302 549 ntBASIC5.87□□□□□ -1.47
COL2A1P02458 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.87□□□□□ -1.47
COL2A1P02458 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.87□□□□□ -1.47
COL2A1P02458 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.87□□□□□ -1.47
COL2A1P02458 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.87□□□□□ -1.47
COL2A1P02458 AC093824.1-201ENST00000508796 343 ntBASIC5.87□□□□□ -1.47
COL2A1P02458 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.87□□□□□ -1.47
COL2A1P02458 AC092709.1-201ENST00000521355 1045 ntBASIC5.87□□□□□ -1.47
COL2A1P02458 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.87□□□□□ -1.47
COL2A1P02458 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.87□□□□□ -1.47
COL2A1P02458 MIR4675-201ENST00000577898 77 ntBASIC5.87□□□□□ -1.47
COL2A1P02458 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
COL2A1P02458 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
COL2A1P02458 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL2A1P02458 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
COL2A1P02458 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms