Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
USH2AO75445 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC2.15□□□□□ -2.07
USH2AO75445 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
USH2AO75445 RNA5SP130-201ENST00000364431 114 ntBASIC2.15□□□□□ -2.07
USH2AO75445 AC116036.1-201ENST00000412199 367 ntBASIC2.15□□□□□ -2.07
USH2AO75445 OR51B3P-201ENST00000412287 913 ntBASIC2.15□□□□□ -2.07
USH2AO75445 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC2.15□□□□□ -2.07
USH2AO75445 ABCF2P2-201ENST00000450549 296 ntBASIC2.15□□□□□ -2.07
USH2AO75445 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC2.15□□□□□ -2.07
USH2AO75445 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC2.15□□□□□ -2.07
USH2AO75445 KCTD9P4-201ENST00000526766 1166 ntBASIC2.15□□□□□ -2.07
USH2AO75445 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
USH2AO75445 TRAV8-5-201ENST00000537369 341 ntBASIC2.15□□□□□ -2.07
USH2AO75445 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC2.15□□□□□ -2.07
USH2AO75445 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC2.15□□□□□ -2.07
USH2AO75445 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC2.15□□□□□ -2.07
USH2AO75445 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC2.15□□□□□ -2.07
USH2AO75445 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC2.15□□□□□ -2.07
USH2AO75445 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC2.15□□□□□ -2.07
USH2AO75445 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 DCN-218ENST00000551354 2924 ntTSL 3 BASIC2.15□□□□□ -2.07
USH2AO75445 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
USH2AO75445 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC2.15□□□□□ -2.07
USH2AO75445 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 OPCML-201ENST00000331898 6833 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
USH2AO75445 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC2.15□□□□□ -2.07
USH2AO75445 AC068533.1-201ENST00000418542 415 ntBASIC2.15□□□□□ -2.07
USH2AO75445 VN1R21P-201ENST00000426703 765 ntBASIC2.15□□□□□ -2.07
USH2AO75445 NDUFB4P8-201ENST00000435351 367 ntBASIC2.15□□□□□ -2.07
USH2AO75445 TXNP2-201ENST00000443918 295 ntBASIC2.15□□□□□ -2.07
USH2AO75445 RPS7P7-201ENST00000463499 571 ntBASIC2.15□□□□□ -2.07
USH2AO75445 AC015795.1-201ENST00000513669 327 ntBASIC2.15□□□□□ -2.07
USH2AO75445 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.15□□□□□ -2.07
USH2AO75445 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC2.15□□□□□ -2.07
USH2AO75445 AC027369.5-201ENST00000533838 755 ntBASIC2.15□□□□□ -2.07
USH2AO75445 RN7SL802P-201ENST00000577858 299 ntBASIC2.15□□□□□ -2.07
USH2AO75445 AC012409.3-201ENST00000611343 981 ntBASIC2.15□□□□□ -2.07
USH2AO75445 AL442067.2-201ENST00000614033 363 ntBASIC2.15□□□□□ -2.07
USH2AO75445 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 AC068722.2-201ENST00000618734 544 ntBASIC2.15□□□□□ -2.07
USH2AO75445 SCARNA15.3-201ENST00000626315 122 ntBASIC2.15□□□□□ -2.07
USH2AO75445 SCARNA4.1-201ENST00000628597 123 ntBASIC2.15□□□□□ -2.07
USH2AO75445 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
USH2AO75445 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
USH2AO75445 ANAPC1P1-201ENST00000426186 2145 ntBASIC2.15□□□□□ -2.07
USH2AO75445 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC2.15□□□□□ -2.07
USH2AO75445 AC131649.2-201ENST00000624925 4439 ntBASIC2.15□□□□□ -2.07
USH2AO75445 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 AC016745.2-201ENST00000608834 3443 ntBASIC2.15□□□□□ -2.07
USH2AO75445 AL442639.1-201ENST00000625030 1899 ntBASIC2.15□□□□□ -2.07
USH2AO75445 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
USH2AO75445 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC2.14□□□□□ -2.07
USH2AO75445 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 RPL7P9-201ENST00000468715 747 ntBASIC2.14□□□□□ -2.07
USH2AO75445 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.14□□□□□ -2.07
USH2AO75445 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC2.14□□□□□ -2.07
USH2AO75445 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.14□□□□□ -2.07
USH2AO75445 OR5B10P-201ENST00000532869 642 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 AL163952.1-202ENST00000569625 600 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC2.14□□□□□ -2.07
USH2AO75445 AC020978.9-201ENST00000624380 1141 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AL356121.2-201ENST00000624715 780 ntBASIC2.14□□□□□ -2.07
USH2AO75445 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC2.14□□□□□ -2.07
USH2AO75445 COL11A1-202ENST00000358392 7327 ntAPPRIS ALT1 TSL 5 BASIC2.14□□□□□ -2.07
USH2AO75445 AL731532.1-201ENST00000623972 4236 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AP005432.1-201ENST00000580891 3485 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AC022034.1-201ENST00000512867 2156 ntBASIC2.14□□□□□ -2.07
USH2AO75445 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
USH2AO75445 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
USH2AO75445 NACA3P-201ENST00000359690 648 ntBASIC2.14□□□□□ -2.07
USH2AO75445 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USH2AO75445 AL353626.3-201ENST00000413399 657 ntBASIC2.14□□□□□ -2.07
USH2AO75445 TCEA1P4-201ENST00000415066 844 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AK3P5-201ENST00000432033 519 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AL050321.1-201ENST00000432363 400 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AC097523.2-201ENST00000435551 652 ntBASIC2.14□□□□□ -2.07
USH2AO75445 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC2.14□□□□□ -2.07
USH2AO75445 RPL7P49-201ENST00000471402 708 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AC025518.1-201ENST00000479856 347 ntBASIC2.14□□□□□ -2.07
USH2AO75445 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms