Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC007618.1-201ENST00000366455 732 ntBASIC4.95□□□□□ -1.62
HCN1O60741 RNU6-171P-201ENST00000384354 107 ntBASIC4.95□□□□□ -1.62
HCN1O60741 RNU6-1320P-201ENST00000390838 107 ntBASIC4.95□□□□□ -1.62
HCN1O60741 RNU6-1269P-201ENST00000391139 107 ntBASIC4.95□□□□□ -1.62
HCN1O60741 RN7SKP278-201ENST00000410504 342 ntBASIC4.95□□□□□ -1.62
HCN1O60741 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HCN1O60741 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.95□□□□□ -1.62
HCN1O60741 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HCN1O60741 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HCN1O60741 DSTNP5-201ENST00000427921 523 ntBASIC4.95□□□□□ -1.62
HCN1O60741 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.95□□□□□ -1.62
HCN1O60741 RPL19P16-201ENST00000433839 588 ntBASIC4.95□□□□□ -1.62
HCN1O60741 CNOT7P2-201ENST00000441051 832 ntBASIC4.95□□□□□ -1.62
HCN1O60741 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.95□□□□□ -1.62
HCN1O60741 TPT1P1-201ENST00000458495 518 ntBASIC4.95□□□□□ -1.62
HCN1O60741 RNU6-599P-201ENST00000459383 107 ntBASIC4.95□□□□□ -1.62
HCN1O60741 RNU6-1193P-201ENST00000459461 107 ntBASIC4.95□□□□□ -1.62
HCN1O60741 IGBP1P4-201ENST00000503202 879 ntBASIC4.95□□□□□ -1.62
HCN1O60741 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.95□□□□□ -1.62
HCN1O60741 HIGD1AP14-201ENST00000507617 282 ntBASIC4.95□□□□□ -1.62
HCN1O60741 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HCN1O60741 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.95□□□□□ -1.62
HCN1O60741 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.95□□□□□ -1.62
HCN1O60741 SCARNA20.4-201ENST00000516969 131 ntBASIC4.95□□□□□ -1.62
HCN1O60741 AP002981.1-201ENST00000517692 975 ntBASIC4.95□□□□□ -1.62
HCN1O60741 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.95□□□□□ -1.62
HCN1O60741 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.95□□□□□ -1.62
HCN1O60741 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HCN1O60741 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
HCN1O60741 AC018552.1-201ENST00000562099 811 ntBASIC4.95□□□□□ -1.62
HCN1O60741 MIR4675-201ENST00000577898 77 ntBASIC4.95□□□□□ -1.62
HCN1O60741 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HCN1O60741 AP005262.1-201ENST00000582646 997 ntBASIC4.95□□□□□ -1.62
HCN1O60741 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.95□□□□□ -1.62
HCN1O60741 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.95□□□□□ -1.62
HCN1O60741 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.95□□□□□ -1.62
HCN1O60741 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.95□□□□□ -1.62
HCN1O60741 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HCN1O60741 RNU6-368P-201ENST00000620928 107 ntBASIC4.95□□□□□ -1.62
HCN1O60741 RNU6-538P-201ENST00000622329 107 ntBASIC4.95□□□□□ -1.62
HCN1O60741 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.95□□□□□ -1.62
HCN1O60741 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.95□□□□□ -1.62
HCN1O60741 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HCN1O60741 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HCN1O60741 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
HCN1O60741 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
HCN1O60741 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.95□□□□□ -1.62
HCN1O60741 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HCN1O60741 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HCN1O60741 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HCN1O60741 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HCN1O60741 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.95□□□□□ -1.62
HCN1O60741 AC022417.1-201ENST00000624768 1303 ntBASIC4.95□□□□□ -1.62
HCN1O60741 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.94□□□□□ -1.62
HCN1O60741 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.94□□□□□ -1.62
HCN1O60741 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.94□□□□□ -1.62
HCN1O60741 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HCN1O60741 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HCN1O60741 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HCN1O60741 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.94□□□□□ -1.62
HCN1O60741 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HCN1O60741 AL731566.1-201ENST00000620490 1937 ntBASIC4.94□□□□□ -1.62
HCN1O60741 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HCN1O60741 RNU1-19P-201ENST00000363306 165 ntBASIC4.94□□□□□ -1.62
HCN1O60741 OR1L6-202ENST00000373684 1044 ntBASIC4.94□□□□□ -1.62
HCN1O60741 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HCN1O60741 RNA5SP339-201ENST00000390987 122 ntBASIC4.94□□□□□ -1.62
HCN1O60741 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
HCN1O60741 RPL21P67-201ENST00000402896 478 ntBASIC4.94□□□□□ -1.62
HCN1O60741 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.94□□□□□ -1.62
HCN1O60741 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.94□□□□□ -1.62
HCN1O60741 HSPD1P12-201ENST00000429127 1069 ntBASIC4.94□□□□□ -1.62
HCN1O60741 FAM96AP1-201ENST00000430879 482 ntBASIC4.94□□□□□ -1.62
HCN1O60741 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.94□□□□□ -1.62
HCN1O60741 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.94□□□□□ -1.62
HCN1O60741 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.94□□□□□ -1.62
HCN1O60741 AC245028.2-201ENST00000458673 253 ntBASIC4.94□□□□□ -1.62
HCN1O60741 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HCN1O60741 AC079841.1-201ENST00000481228 950 ntBASIC4.94□□□□□ -1.62
HCN1O60741 TRBV8-1-201ENST00000481590 279 ntBASIC4.94□□□□□ -1.62
HCN1O60741 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.94□□□□□ -1.62
HCN1O60741 RPS24P16-201ENST00000497294 392 ntBASIC4.94□□□□□ -1.62
HCN1O60741 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.94□□□□□ -1.62
HCN1O60741 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.94□□□□□ -1.62
HCN1O60741 PGAM1P13-201ENST00000507497 754 ntBASIC4.94□□□□□ -1.62
HCN1O60741 AC109464.1-201ENST00000511091 819 ntBASIC4.94□□□□□ -1.62
HCN1O60741 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.94□□□□□ -1.62
HCN1O60741 RN7SKP34-201ENST00000516142 244 ntBASIC4.94□□□□□ -1.62
HCN1O60741 HMGB1P40-201ENST00000525121 540 ntBASIC4.94□□□□□ -1.62
HCN1O60741 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.94□□□□□ -1.62
HCN1O60741 HAUS8P1-201ENST00000549005 542 ntBASIC4.94□□□□□ -1.62
HCN1O60741 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.94□□□□□ -1.62
HCN1O60741 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.94□□□□□ -1.62
HCN1O60741 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.94□□□□□ -1.62
HCN1O60741 PRPF19P1-201ENST00000584766 898 ntBASIC4.94□□□□□ -1.62
HCN1O60741 MIR4443-201ENST00000585052 53 ntBASIC4.94□□□□□ -1.62
HCN1O60741 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.94□□□□□ -1.62
HCN1O60741 AP005212.4-201ENST00000614206 710 ntBASIC4.94□□□□□ -1.62
HCN1O60741 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.94□□□□□ -1.62
HCN1O60741 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms