Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX3O60493 GAPDHP25-201ENST00000447061 1001 ntBASIC5.07□□□□□ -1.6
SNX3O60493 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX3O60493 PPIAP27-201ENST00000453800 265 ntBASIC5.07□□□□□ -1.6
SNX3O60493 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SNX3O60493 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX3O60493 AC022795.1-201ENST00000473808 480 ntBASIC5.07□□□□□ -1.6
SNX3O60493 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX3O60493 PSMA2P2-201ENST00000504319 686 ntBASIC5.07□□□□□ -1.6
SNX3O60493 AC097173.1-201ENST00000505862 819 ntBASIC5.07□□□□□ -1.6
SNX3O60493 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX3O60493 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNX3O60493 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.07□□□□□ -1.6
SNX3O60493 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.07□□□□□ -1.6
SNX3O60493 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX3O60493 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNX3O60493 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX3O60493 AL390334.1-201ENST00000556395 450 ntBASIC5.07□□□□□ -1.6
SNX3O60493 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX3O60493 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.07□□□□□ -1.6
SNX3O60493 AC124916.2-201ENST00000604416 224 ntBASIC5.07□□□□□ -1.6
SNX3O60493 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.07□□□□□ -1.6
SNX3O60493 AL118522.2-201ENST00000616045 615 ntBASIC5.07□□□□□ -1.6
SNX3O60493 AL356094.1-201ENST00000624663 1212 ntBASIC5.07□□□□□ -1.6
SNX3O60493 AC087565.3-203ENST00000641018 837 ntBASIC5.07□□□□□ -1.6
SNX3O60493 AL596275.2-207ENST00000641188 675 ntBASIC5.07□□□□□ -1.6
SNX3O60493 AL596275.2-204ENST00000641628 552 ntBASIC5.07□□□□□ -1.6
SNX3O60493 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SNX3O60493 AL596275.2-206ENST00000641957 626 ntBASIC5.07□□□□□ -1.6
SNX3O60493 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX3O60493 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNX3O60493 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SNX3O60493 CDC27P2-201ENST00000425026 1922 ntBASIC5.07□□□□□ -1.6
SNX3O60493 DHX9P1-201ENST00000436565 3076 ntBASIC5.07□□□□□ -1.6
SNX3O60493 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNX3O60493 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SNX3O60493 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX3O60493 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX3O60493 DDX6P1-205ENST00000441966 1436 ntBASIC5.06□□□□□ -1.6
SNX3O60493 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNX3O60493 CASC19-221ENST00000641309 1382 ntBASIC5.06□□□□□ -1.6
SNX3O60493 DDX18P4-201ENST00000511690 1966 ntBASIC5.06□□□□□ -1.6
SNX3O60493 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNX3O60493 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNX3O60493 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX3O60493 AL512422.1-201ENST00000407033 553 ntBASIC5.06□□□□□ -1.6
SNX3O60493 MIR1203-201ENST00000408812 85 ntBASIC5.06□□□□□ -1.6
SNX3O60493 AC234781.4-201ENST00000419384 244 ntBASIC5.06□□□□□ -1.6
SNX3O60493 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX3O60493 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX3O60493 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX3O60493 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNX3O60493 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX3O60493 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX3O60493 MTND5P8-201ENST00000449817 1083 ntBASIC5.06□□□□□ -1.6
SNX3O60493 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNX3O60493 HMGB1P47-201ENST00000511281 589 ntBASIC5.06□□□□□ -1.6
SNX3O60493 TCP11X3P-202ENST00000514289 1254 ntBASIC5.06□□□□□ -1.6
SNX3O60493 RNA5SP438-201ENST00000516561 112 ntBASIC5.06□□□□□ -1.6
SNX3O60493 HMGB1P19-201ENST00000517578 577 ntBASIC5.06□□□□□ -1.6
SNX3O60493 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX3O60493 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX3O60493 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX3O60493 YWHABP2-201ENST00000540201 713 ntBASIC5.06□□□□□ -1.6
SNX3O60493 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SNX3O60493 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.06□□□□□ -1.6
SNX3O60493 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNX3O60493 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNX3O60493 RN7SL52P-201ENST00000584271 284 ntBASIC5.06□□□□□ -1.6
SNX3O60493 AC015802.2-201ENST00000589690 189 ntBASIC5.06□□□□□ -1.6
SNX3O60493 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.06□□□□□ -1.6
SNX3O60493 AL133247.2-201ENST00000603236 482 ntBASIC5.06□□□□□ -1.6
SNX3O60493 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.06□□□□□ -1.6
SNX3O60493 RN7SL787P-201ENST00000613000 284 ntBASIC5.06□□□□□ -1.6
SNX3O60493 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.06□□□□□ -1.6
SNX3O60493 AP003499.2-201ENST00000624100 483 ntBASIC5.06□□□□□ -1.6
SNX3O60493 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
SNX3O60493 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX3O60493 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX3O60493 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNX3O60493 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SNX3O60493 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.06□□□□□ -1.6
SNX3O60493 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
SNX3O60493 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNX3O60493 SCARNA15-201ENST00000607520 4325 ntBASIC5.06□□□□□ -1.6
SNX3O60493 CASC19-206ENST00000641028 1430 ntBASIC5.06□□□□□ -1.6
SNX3O60493 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.05□□□□□ -1.6
SNX3O60493 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SNX3O60493 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.05□□□□□ -1.6
SNX3O60493 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.05□□□□□ -1.6
SNX3O60493 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SNX3O60493 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNX3O60493 AL034370.1-201ENST00000397254 1590 ntBASIC5.05□□□□□ -1.6
SNX3O60493 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SNX3O60493 SNORD65-201ENST00000391079 73 ntBASIC5.05□□□□□ -1.6
SNX3O60493 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNX3O60493 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SNX3O60493 FABP7P1-201ENST00000424004 391 ntBASIC5.05□□□□□ -1.6
SNX3O60493 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.05□□□□□ -1.6
SNX3O60493 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms