Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.78□□□□□ -1.64
UPK1AO00322 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
UPK1AO00322 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
UPK1AO00322 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
UPK1AO00322 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.78□□□□□ -1.64
UPK1AO00322 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
UPK1AO00322 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.78□□□□□ -1.64
UPK1AO00322 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.78□□□□□ -1.64
UPK1AO00322 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
UPK1AO00322 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.78□□□□□ -1.64
UPK1AO00322 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.78□□□□□ -1.64
UPK1AO00322 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.78□□□□□ -1.64
UPK1AO00322 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.78□□□□□ -1.64
UPK1AO00322 COX6CP13-201ENST00000428703 226 ntBASIC4.78□□□□□ -1.64
UPK1AO00322 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.78□□□□□ -1.64
UPK1AO00322 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.78□□□□□ -1.64
UPK1AO00322 BTG4P1-201ENST00000510421 183 ntBASIC4.78□□□□□ -1.64
UPK1AO00322 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
UPK1AO00322 AC116553.2-201ENST00000564203 463 ntBASIC4.78□□□□□ -1.64
UPK1AO00322 AL390726.5-202ENST00000564800 256 ntBASIC4.78□□□□□ -1.64
UPK1AO00322 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.78□□□□□ -1.64
UPK1AO00322 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.78□□□□□ -1.64
UPK1AO00322 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.78□□□□□ -1.64
UPK1AO00322 AC006272.2-201ENST00000594725 163 ntBASIC4.78□□□□□ -1.64
UPK1AO00322 AC126915.2-201ENST00000610957 190 ntBASIC4.78□□□□□ -1.64
UPK1AO00322 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
UPK1AO00322 AC012078.1-201ENST00000405035 1646 ntBASIC4.78□□□□□ -1.64
UPK1AO00322 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
UPK1AO00322 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UPK1AO00322 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UPK1AO00322 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UPK1AO00322 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.77□□□□□ -1.65
UPK1AO00322 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UPK1AO00322 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.77□□□□□ -1.65
UPK1AO00322 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UPK1AO00322 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
UPK1AO00322 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.77□□□□□ -1.65
UPK1AO00322 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UPK1AO00322 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UPK1AO00322 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
UPK1AO00322 SNORA2.3-201ENST00000383920 135 ntBASIC4.77□□□□□ -1.65
UPK1AO00322 RN7SKP126-201ENST00000411143 300 ntBASIC4.77□□□□□ -1.65
UPK1AO00322 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.77□□□□□ -1.65
UPK1AO00322 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.77□□□□□ -1.65
UPK1AO00322 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.77□□□□□ -1.65
UPK1AO00322 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.77□□□□□ -1.65
UPK1AO00322 AC091180.1-201ENST00000462104 372 ntBASIC4.77□□□□□ -1.65
UPK1AO00322 AC072052.1-201ENST00000496556 306 ntBASIC4.77□□□□□ -1.65
UPK1AO00322 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
UPK1AO00322 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UPK1AO00322 MIR4489-201ENST00000578869 62 ntBASIC4.77□□□□□ -1.65
UPK1AO00322 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.77□□□□□ -1.65
UPK1AO00322 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.77□□□□□ -1.65
UPK1AO00322 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.77□□□□□ -1.65
UPK1AO00322 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
UPK1AO00322 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
UPK1AO00322 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
UPK1AO00322 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
UPK1AO00322 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
UPK1AO00322 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UPK1AO00322 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.77□□□□□ -1.65
UPK1AO00322 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UPK1AO00322 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.77□□□□□ -1.65
UPK1AO00322 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
UPK1AO00322 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.77□□□□□ -1.65
UPK1AO00322 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
UPK1AO00322 PABPC1P6-201ENST00000445594 1829 ntBASIC4.76□□□□□ -1.65
UPK1AO00322 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
UPK1AO00322 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UPK1AO00322 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
UPK1AO00322 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.76□□□□□ -1.65
UPK1AO00322 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.76□□□□□ -1.65
UPK1AO00322 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UPK1AO00322 RN7SKP113-201ENST00000363891 295 ntBASIC4.76□□□□□ -1.65
UPK1AO00322 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
UPK1AO00322 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.76□□□□□ -1.65
UPK1AO00322 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
UPK1AO00322 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UPK1AO00322 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UPK1AO00322 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.76□□□□□ -1.65
UPK1AO00322 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UPK1AO00322 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.76□□□□□ -1.65
UPK1AO00322 FAR2P1-206ENST00000449736 709 ntBASIC4.76□□□□□ -1.65
UPK1AO00322 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.76□□□□□ -1.65
UPK1AO00322 AL389915.2-201ENST00000454576 441 ntBASIC4.76□□□□□ -1.65
UPK1AO00322 RN7SL172P-201ENST00000460535 303 ntBASIC4.76□□□□□ -1.65
UPK1AO00322 RN7SL443P-201ENST00000464331 290 ntBASIC4.76□□□□□ -1.65
UPK1AO00322 AC090686.1-201ENST00000481577 749 ntBASIC4.76□□□□□ -1.65
UPK1AO00322 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.76□□□□□ -1.65
UPK1AO00322 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.76□□□□□ -1.65
UPK1AO00322 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.76□□□□□ -1.65
UPK1AO00322 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.76□□□□□ -1.65
UPK1AO00322 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.76□□□□□ -1.65
UPK1AO00322 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.76□□□□□ -1.65
UPK1AO00322 AP005262.1-201ENST00000582646 997 ntBASIC4.76□□□□□ -1.65
UPK1AO00322 AC019072.1-201ENST00000604535 1551 ntBASIC4.76□□□□□ -1.65
UPK1AO00322 MIR6862-1-201ENST00000613016 70 ntBASIC4.76□□□□□ -1.65
UPK1AO00322 MIR6862-2-201ENST00000614755 70 ntBASIC4.76□□□□□ -1.65
UPK1AO00322 MIR6729-201ENST00000618194 65 ntBASIC4.76□□□□□ -1.65
UPK1AO00322 AC099494.2-201ENST00000623371 978 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms