Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 AC114982.2-201ENST00000461396 358 ntBASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 AC012339.2-201ENST00000523996 453 ntBASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 AC022404.1-201ENST00000555320 273 ntBASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 AC008521.2-201ENST00000591021 259 ntBASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 AC109309.2-201ENST00000612597 332 ntBASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 AC005840.5-201ENST00000619166 599 ntBASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 AC026124.2-201ENST00000621847 656 ntBASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 NEAT1-202ENST00000501122 22743 ntBASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AL672167.1-205ENST00000641112 3080 ntBASIC5□□□□□ -1.61
TRIM49D1C9J1S8 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 TMSB4XP4-201ENST00000323496 618 ntBASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 CKS1BP6-201ENST00000424932 240 ntBASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 RPSAP41-201ENST00000439695 860 ntBASIC5□□□□□ -1.61
TRIM49D1C9J1S8 RPS29P9-201ENST00000440360 171 ntBASIC5□□□□□ -1.61
TRIM49D1C9J1S8 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 RHEBP2-201ENST00000450289 600 ntBASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AC020890.1-201ENST00000491837 504 ntBASIC5□□□□□ -1.61
TRIM49D1C9J1S8 RN7SL466P-201ENST00000497546 295 ntBASIC5□□□□□ -1.61
TRIM49D1C9J1S8 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 IGKV3D-34-201ENST00000522638 302 ntBASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AL359513.1-201ENST00000614364 557 ntBASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 PANDAR-201ENST00000629595 1506 ntBASIC5□□□□□ -1.61
TRIM49D1C9J1S8 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM49D1C9J1S8 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 AC009643.2-201ENST00000603543 1448 ntBASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 SNORA70.10-201ENST00000384515 134 ntBASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 AL031985.1-201ENST00000392713 418 ntBASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 AC009804.1-201ENST00000400949 179 ntBASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 EIF4A1P1-201ENST00000420241 934 ntBASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 AC104843.2-201ENST00000427666 297 ntBASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 AL161636.2-201ENST00000445179 927 ntBASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 RPS27AP2-201ENST00000457576 465 ntBASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 AC112206.1-201ENST00000468416 477 ntBASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 GOLGA5P1-201ENST00000507317 980 ntBASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 RN7SKP46-201ENST00000515942 234 ntBASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM49D1C9J1S8 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms