Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV5S1A1TA0A578 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 RNA5SP335-201ENST00000363817 110 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AL133388.1-201ENST00000404509 287 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AL355615.1-201ENST00000406187 641 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AC096533.1-201ENST00000411645 353 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 RAB9AP4-201ENST00000415230 609 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AC079809.1-201ENST00000415468 276 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AL158050.1-201ENST00000416077 457 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 VN1R31P-201ENST00000417498 730 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AC241520.1-201ENST00000422654 1099 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 MTCO1P51-201ENST00000427672 1060 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AC124944.2-201ENST00000429866 1242 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 GSTM5P1-201ENST00000434751 660 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 MTCO2P20-201ENST00000437339 673 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 GAPDHP25-201ENST00000447061 1001 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 NOP56P2-201ENST00000447491 769 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 BUD31P2-201ENST00000449374 300 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 CBX1P5-201ENST00000475330 559 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 EIF1P7-201ENST00000487533 337 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 HMGB1P3-201ENST00000502802 616 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AC008427.1-201ENST00000503102 655 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 CDC42P3-201ENST00000518493 633 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AC090888.2-201ENST00000559765 1144 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AGGF1P9-201ENST00000561884 913 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 RN7SL290P-201ENST00000578661 300 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 VN1R87P-201ENST00000596706 487 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 NIFKP6-201ENST00000598115 845 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AC234772.3-201ENST00000602277 528 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AC114878.2-201ENST00000604863 1251 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 AC078880.5-201ENST00000617845 421 ntBASIC5.65□□□□□ -1.5
TCRBV5S1A1TA0A578 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.65□□□□□ -1.51
TCRBV5S1A1TA0A578 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TCRBV5S1A1TA0A578 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TCRBV5S1A1TA0A578 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TCRBV5S1A1TA0A578 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.65□□□□□ -1.51
TCRBV5S1A1TA0A578 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TCRBV5S1A1TA0A578 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
TCRBV5S1A1TA0A578 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.65□□□□□ -1.51
TCRBV5S1A1TA0A578 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TCRBV5S1A1TA0A578 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AL591135.1-201ENST00000401578 5914 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 RAD1P1-201ENST00000231383 813 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 MIR133A2-201ENST00000347538 102 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 RNU1-146P-201ENST00000364015 165 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 SNORA48.4-201ENST00000391089 134 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 RN7SKP293-201ENST00000411389 296 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 BX664727.1-201ENST00000416024 466 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 Z93019.1-201ENST00000416450 973 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AL035246.1-201ENST00000433554 1255 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 RAB9AP5-201ENST00000437794 597 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 RPL5P25-201ENST00000441148 775 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 RAB9AP2-201ENST00000443911 597 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 RPS12P31-201ENST00000491419 398 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AC020699.1-201ENST00000505161 445 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 MTATP6P1-201ENST00000514057 681 ntBASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.64□□□□□ -1.51
TCRBV5S1A1TA0A578 RNA5SP373-201ENST00000517271 95 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms