Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
PCDHB13Q9Y5F0 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PCDHB13Q9Y5F0 LETM2-207ENST00000523983 1776 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 CDY11P-201ENST00000447168 1651 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 PARP1P1-201ENST00000413631 3026 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AC105046.1-201ENST00000566457 4997 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 Y_RNA.210-201ENST00000364161 110 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 Y_RNA.212-201ENST00000364177 102 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 GPN2-201ENST00000374133 715 ntTSL 3 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 RNU1-149P-201ENST00000390870 161 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 RNA5SP256-201ENST00000390978 113 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AL034372.1-201ENST00000407586 754 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 RNA5SP345-201ENST00000410646 108 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AL139135.1-201ENST00000412675 209 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 ATG3P1-201ENST00000419507 911 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 COX6CP15-201ENST00000426313 211 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 PSMA6P3-201ENST00000428242 164 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 RPS10P21-201ENST00000430654 475 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AL022324.2-201ENST00000434827 780 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AC005019.1-201ENST00000436455 431 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AC105402.2-201ENST00000438503 358 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AC098831.1-201ENST00000440661 216 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 TMSB4XP3-201ENST00000445144 114 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 FTH1P27-201ENST00000449509 551 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 RPL39P38-201ENST00000467018 153 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 SNORD27.1-201ENST00000516319 72 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 RN7SKP219-201ENST00000516825 296 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 RNU6-699P-201ENST00000517081 110 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 PPIAP14-201ENST00000577627 496 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AC015674.1-201ENST00000578482 267 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AL158151.4-201ENST00000600965 507 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AC006238.1-201ENST00000609787 534 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AC145207.9-201ENST00000623802 325 ntBASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 GANC-206ENST00000566442 2512 ntTSL 2 BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 RTP3-201ENST00000296142 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PCDHB13Q9Y5F0 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 AC131392.2-201ENST00000505635 4332 ntBASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 AC016251.1-201ENST00000624299 4198 ntBASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 RN7SKP95-201ENST00000362860 303 ntBASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 RNU6-1252P-201ENST00000363054 104 ntBASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 SNORD113-7-201ENST00000363762 77 ntBASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 AL035467.1-201ENST00000403583 686 ntBASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 RPS4XP9-201ENST00000405151 780 ntBASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 U3.34-201ENST00000408198 212 ntBASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC9□□□□□ -0.97
PCDHB13Q9Y5F0 RPS6P23-201ENST00000413224 722 ntBASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms