Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL049874.2-201ENST00000492636 288 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 IGBP1P4-201ENST00000503202 879 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 EIF3KP3-201ENST00000514461 639 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 HMGN1P9-201ENST00000515212 298 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 AC012400.1-201ENST00000518452 381 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 AC119501.1-201ENST00000603646 475 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 AC108738.1-201ENST00000603703 237 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 AL162431.4-201ENST00000604674 411 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 RNU6-84P-201ENST00000607737 102 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 AC133644.2-201ENST00000608142 540 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 AF117829.2-201ENST00000619538 361 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 AP002799.1-201ENST00000623552 423 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 AC112198.2-201ENST00000426589 6996 ntBASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP2Q9UDT6 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 PANDAR-201ENST00000629595 1506 ntBASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 RNU6-249P-201ENST00000363016 102 ntBASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 RPS4XP16-201ENST00000427198 791 ntBASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 RPL7AP49-201ENST00000429522 581 ntBASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 AL591438.1-201ENST00000433508 581 ntBASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 RPL12P3-201ENST00000440080 396 ntBASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 AC079168.1-201ENST00000458741 345 ntBASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 AC016559.2-201ENST00000510759 359 ntBASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 AC127024.5-201ENST00000580085 462 ntBASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 AC009597.2-201ENST00000604659 592 ntBASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.15□□□□□ -1.42
CLIP2Q9UDT6 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
CLIP2Q9UDT6 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.15□□□□□ -1.43
CLIP2Q9UDT6 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.15□□□□□ -1.43
CLIP2Q9UDT6 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CLIP2Q9UDT6 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CLIP2Q9UDT6 HSPA8P18-201ENST00000439846 1928 ntBASIC6.15□□□□□ -1.43
CLIP2Q9UDT6 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CLIP2Q9UDT6 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
CLIP2Q9UDT6 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 RPS27P18-201ENST00000431701 247 ntBASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 AC090804.1-201ENST00000448870 490 ntBASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 RN7SL97P-201ENST00000486780 299 ntBASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 AC011447.4-201ENST00000587562 111 ntBASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 AC008536.1-201ENST00000602872 669 ntBASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 AC004948.1-201ENST00000609858 672 ntBASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 AC015660.5-201ENST00000623238 564 ntBASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 MTCO1P1-201ENST00000624263 1081 ntBASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 DDX18P6-201ENST00000450119 1997 ntBASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 CASC19-281ENST00000642118 1554 ntBASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLIP2Q9UDT6 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.13□□□□□ -1.43
CLIP2Q9UDT6 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms