Protein–RNA interactions for Protein: Q9C098

DCLK3, Serine/threonine-protein kinase DCLK3, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK3Q9C098 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
DCLK3Q9C098 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.69□□□□□ -1.5
DCLK3Q9C098 AP001002.1-201ENST00000625148 1513 ntBASIC5.69□□□□□ -1.5
DCLK3Q9C098 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
DCLK3Q9C098 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
DCLK3Q9C098 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DCLK3Q9C098 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DCLK3Q9C098 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DCLK3Q9C098 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DCLK3Q9C098 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DCLK3Q9C098 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 RNA5SP335-201ENST00000363817 110 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DCLK3Q9C098 SLC35E1P1-201ENST00000419313 864 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 RPL7L1P9-201ENST00000431298 745 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 NPM1P48-201ENST00000436002 853 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 AC013410.1-201ENST00000436223 1232 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 RPS11P7-201ENST00000442125 465 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 AL672138.1-201ENST00000450604 1015 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 HAUS1P1-201ENST00000505275 832 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 AC119751.4-201ENST00000507498 357 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 HMGN1P9-201ENST00000515212 298 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 RNA5SP34-201ENST00000516887 130 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 AC104997.1-201ENST00000519761 717 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 AP003102.1-201ENST00000525638 661 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 OR8G3P-201ENST00000533406 921 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 AC010503.3-201ENST00000594355 540 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 AL391834.2-201ENST00000609982 546 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
DCLK3Q9C098 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 AC074101.1-201ENST00000637861 241 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DCLK3Q9C098 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DCLK3Q9C098 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DCLK3Q9C098 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DCLK3Q9C098 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 MAPK10-328ENST00000641553 4009 ntBASIC5.68□□□□□ -1.5
DCLK3Q9C098 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.68□□□□□ -1.5
DCLK3Q9C098 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DCLK3Q9C098 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
DCLK3Q9C098 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DCLK3Q9C098 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DCLK3Q9C098 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DCLK3Q9C098 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
DCLK3Q9C098 AC006484.1-201ENST00000435086 1884 ntBASIC5.67□□□□□ -1.5
DCLK3Q9C098 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
DCLK3Q9C098 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.67□□□□□ -1.5
DCLK3Q9C098 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.67□□□□□ -1.5
DCLK3Q9C098 OR9K1P-201ENST00000326513 941 ntBASIC5.67□□□□□ -1.5
DCLK3Q9C098 RNA5SP183-201ENST00000362452 119 ntBASIC5.67□□□□□ -1.5
DCLK3Q9C098 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.67□□□□□ -1.5
DCLK3Q9C098 RNU1-77P-201ENST00000390868 162 ntBASIC5.67□□□□□ -1.5
DCLK3Q9C098 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
DCLK3Q9C098 MIR1178-201ENST00000408396 91 ntBASIC5.67□□□□□ -1.5
DCLK3Q9C098 AL390774.1-201ENST00000411924 246 ntBASIC5.67□□□□□ -1.5
DCLK3Q9C098 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.67□□□□□ -1.5
DCLK3Q9C098 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
DCLK3Q9C098 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
DCLK3Q9C098 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.67□□□□□ -1.5
DCLK3Q9C098 PRUNEP1-201ENST00000425846 705 ntBASIC5.67□□□□□ -1.5
DCLK3Q9C098 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.67□□□□□ -1.5
DCLK3Q9C098 DSTNP5-201ENST00000427921 523 ntBASIC5.67□□□□□ -1.5
DCLK3Q9C098 MTND4LP7-201ENST00000431728 294 ntBASIC5.67□□□□□ -1.5
DCLK3Q9C098 AC016772.1-201ENST00000444170 1261 ntBASIC5.67□□□□□ -1.5
DCLK3Q9C098 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.67□□□□□ -1.5
DCLK3Q9C098 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.67□□□□□ -1.5
DCLK3Q9C098 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.67□□□□□ -1.5
DCLK3Q9C098 AC024558.1-201ENST00000505008 528 ntBASIC5.67□□□□□ -1.5
DCLK3Q9C098 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.67□□□□□ -1.5
DCLK3Q9C098 AC025768.1-201ENST00000510057 267 ntBASIC5.67□□□□□ -1.5
DCLK3Q9C098 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.67□□□□□ -1.5
DCLK3Q9C098 CDC42P3-201ENST00000518493 633 ntBASIC5.67□□□□□ -1.5
DCLK3Q9C098 AC020937.1-201ENST00000519677 1013 ntBASIC5.67□□□□□ -1.5
DCLK3Q9C098 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.67□□□□□ -1.5
DCLK3Q9C098 OR10D4P-201ENST00000525892 951 ntBASIC5.67□□□□□ -1.5
DCLK3Q9C098 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.67□□□□□ -1.5
DCLK3Q9C098 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms