Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
IFT140Q96RY7 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC8.22□□□□□ -1.09
IFT140Q96RY7 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
IFT140Q96RY7 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
IFT140Q96RY7 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
IFT140Q96RY7 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.21□□□□□ -1.09
IFT140Q96RY7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
IFT140Q96RY7 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.09
IFT140Q96RY7 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC8.21□□□□□ -1.09
IFT140Q96RY7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC8.21□□□□□ -1.09
IFT140Q96RY7 RN7SL441P-201ENST00000492388 296 ntBASIC8.21□□□□□ -1.09
IFT140Q96RY7 AC104971.1-201ENST00000495117 578 ntBASIC8.21□□□□□ -1.09
IFT140Q96RY7 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
IFT140Q96RY7 RN7SL802P-201ENST00000577858 299 ntBASIC8.21□□□□□ -1.09
IFT140Q96RY7 AC007497.1-201ENST00000610421 561 ntBASIC8.21□□□□□ -1.09
IFT140Q96RY7 AC015712.7-201ENST00000615211 635 ntBASIC8.21□□□□□ -1.09
IFT140Q96RY7 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
IFT140Q96RY7 AC002044.3-201ENST00000623314 541 ntBASIC8.21□□□□□ -1.09
IFT140Q96RY7 AC087821.1-201ENST00000623639 567 ntBASIC8.21□□□□□ -1.09
IFT140Q96RY7 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.09
IFT140Q96RY7 AC004076.2-201ENST00000620532 3323 ntBASIC8.21□□□□□ -1.1
IFT140Q96RY7 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
IFT140Q96RY7 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.21□□□□□ -1.1
IFT140Q96RY7 DMD-202ENST00000343523 5623 ntTSL 5 BASIC8.21□□□□□ -1.1
IFT140Q96RY7 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.1
IFT140Q96RY7 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
IFT140Q96RY7 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
IFT140Q96RY7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
IFT140Q96RY7 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.2□□□□□ -1.1
IFT140Q96RY7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
IFT140Q96RY7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC8.2□□□□□ -1.1
IFT140Q96RY7 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC8.2□□□□□ -1.1
IFT140Q96RY7 CYCSP34-201ENST00000458172 304 ntBASIC8.2□□□□□ -1.1
IFT140Q96RY7 RPL7P19-201ENST00000469948 618 ntBASIC8.2□□□□□ -1.1
IFT140Q96RY7 AP002812.1-201ENST00000495378 474 ntBASIC8.2□□□□□ -1.1
IFT140Q96RY7 IGBP1P4-201ENST00000503202 879 ntBASIC8.2□□□□□ -1.1
IFT140Q96RY7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC8.2□□□□□ -1.1
IFT140Q96RY7 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC8.2□□□□□ -1.1
IFT140Q96RY7 MIR6839-201ENST00000620425 113 ntBASIC8.2□□□□□ -1.1
IFT140Q96RY7 AC069542.2-201ENST00000624816 216 ntBASIC8.2□□□□□ -1.1
IFT140Q96RY7 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
IFT140Q96RY7 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
IFT140Q96RY7 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
IFT140Q96RY7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC8.2□□□□□ -1.1
IFT140Q96RY7 AC007382.1-201ENST00000624376 2618 ntBASIC8.2□□□□□ -1.1
IFT140Q96RY7 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
IFT140Q96RY7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
IFT140Q96RY7 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
IFT140Q96RY7 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
IFT140Q96RY7 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
IFT140Q96RY7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
IFT140Q96RY7 SNORA70.10-201ENST00000384515 134 ntBASIC8.19□□□□□ -1.1
IFT140Q96RY7 RNA5SP345-201ENST00000410646 108 ntBASIC8.19□□□□□ -1.1
IFT140Q96RY7 NRBF2P2-201ENST00000413087 861 ntBASIC8.19□□□□□ -1.1
IFT140Q96RY7 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
IFT140Q96RY7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 RPL23AP24-201ENST00000458203 385 ntBASIC8.19□□□□□ -1.1
IFT140Q96RY7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 CR383656.1-201ENST00000484916 377 ntBASIC8.19□□□□□ -1.1
IFT140Q96RY7 AC005412.2-201ENST00000492004 341 ntBASIC8.19□□□□□ -1.1
IFT140Q96RY7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
IFT140Q96RY7 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
IFT140Q96RY7 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
IFT140Q96RY7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 RN7SKP280-201ENST00000364196 304 ntBASIC8.19□□□□□ -1.1
IFT140Q96RY7 SNORA70.4-201ENST00000365509 134 ntBASIC8.19□□□□□ -1.1
IFT140Q96RY7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
IFT140Q96RY7 ATP5F1P2-201ENST00000398143 760 ntBASIC8.19□□□□□ -1.1
IFT140Q96RY7 AL645608.4-201ENST00000423619 154 ntBASIC8.19□□□□□ -1.1
IFT140Q96RY7 AC017019.1-201ENST00000426129 261 ntBASIC8.19□□□□□ -1.1
IFT140Q96RY7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 NDUFB4P8-201ENST00000435351 367 ntBASIC8.19□□□□□ -1.1
IFT140Q96RY7 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 RPS17P2-201ENST00000461663 408 ntBASIC8.19□□□□□ -1.1
IFT140Q96RY7 RPS12P31-201ENST00000491419 398 ntBASIC8.19□□□□□ -1.1
IFT140Q96RY7 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 AC019206.1-201ENST00000621938 425 ntBASIC8.19□□□□□ -1.1
IFT140Q96RY7 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
IFT140Q96RY7 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
IFT140Q96RY7 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
IFT140Q96RY7 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC8.18□□□□□ -1.1
IFT140Q96RY7 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC8.18□□□□□ -1.1
IFT140Q96RY7 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
IFT140Q96RY7 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
IFT140Q96RY7 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC8.18□□□□□ -1.1
IFT140Q96RY7 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
IFT140Q96RY7 RN7SKP224-201ENST00000364140 325 ntBASIC8.18□□□□□ -1.1
IFT140Q96RY7 RNU1-13P-201ENST00000384499 162 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms