Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 SMG1P5-202ENST00000529428 4219 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 SMG1P2-201ENST00000566127 4221 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 MIR191-201ENST00000384873 92 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 MT-TP-201ENST00000387461 68 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC136624.1-201ENST00000400791 413 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 RNU6-575P-201ENST00000411326 105 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 EIF1P1-201ENST00000421436 341 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AL139415.2-201ENST00000431968 163 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AL645939.3-201ENST00000435408 225 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 RPSAP40-201ENST00000442343 891 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 ZNF619P1-201ENST00000446539 752 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 RPS18P1-201ENST00000447840 458 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC116337.2-201ENST00000477662 156 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 RN7SL413P-201ENST00000482700 297 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 OR11I1P-201ENST00000486033 954 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC005832.3-201ENST00000537929 631 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC027667.1-201ENST00000545814 304 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC092718.4-201ENST00000566639 716 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 MIR5095-201ENST00000578844 88 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 MIR4666A-201ENST00000580160 79 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AP003973.1-201ENST00000604639 691 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 BNIP3P4-201ENST00000604946 565 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AL109618.2-201ENST00000605527 211 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC090186.1-201ENST00000605991 572 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC092354.1-201ENST00000606057 376 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC025594.3-201ENST00000613068 790 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC026368.1-201ENST00000614934 690 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC048341.3-201ENST00000619323 491 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 WBP11P1-201ENST00000562560 1931 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AC007012.2-201ENST00000623206 1676 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AL353743.4-201ENST00000422653 1547 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.2□□□□□ -1.42
PTCHD1Q96NR3 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC092447.7-201ENST00000422212 1621 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 UGT2B27P-201ENST00000505092 1620 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 OR56A4-201ENST00000330728 1209 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 RNA5SP85-201ENST00000365378 119 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 RNU6-452P-201ENST00000384406 107 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 TPT1P2-201ENST00000413105 503 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 MRPS36P1-201ENST00000421291 307 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 HMGB1P45-201ENST00000435986 653 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 FABP5P2-201ENST00000439042 408 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC009263.1-201ENST00000441193 1239 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 RBMX2P4-201ENST00000441256 376 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 COL11A2P1-205ENST00000441798 676 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 RPL36AP33-201ENST00000450395 310 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 DDX39BP2-208ENST00000453923 258 ntBASIC6.19□□□□□ -1.42
PTCHD1Q96NR3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms