Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
C9orf72Q96LT7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 TET1P1-201ENST00000426627 2301 ntBASIC5.29□□□□□ -1.56
C9orf72Q96LT7 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 MIR105-1-201ENST00000385222 81 ntBASIC5.29□□□□□ -1.56
C9orf72Q96LT7 AL390316.1-201ENST00000406279 553 ntBASIC5.29□□□□□ -1.56
C9orf72Q96LT7 DPPA2P3-201ENST00000411853 655 ntBASIC5.29□□□□□ -1.56
C9orf72Q96LT7 AL121878.1-201ENST00000418638 859 ntBASIC5.29□□□□□ -1.56
C9orf72Q96LT7 OR5M12P-201ENST00000423388 929 ntBASIC5.29□□□□□ -1.56
C9orf72Q96LT7 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 CNOT7P2-201ENST00000441051 832 ntBASIC5.29□□□□□ -1.56
C9orf72Q96LT7 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 AC069304.1-201ENST00000491593 704 ntBASIC5.29□□□□□ -1.56
C9orf72Q96LT7 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 OR10G5P-201ENST00000532733 358 ntBASIC5.29□□□□□ -1.56
C9orf72Q96LT7 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 AC011840.5-201ENST00000582125 771 ntBASIC5.29□□□□□ -1.56
C9orf72Q96LT7 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.29□□□□□ -1.56
C9orf72Q96LT7 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 AC109780.1-201ENST00000451768 1344 ntBASIC5.28□□□□□ -1.56
C9orf72Q96LT7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 RNU1-146P-201ENST00000364015 165 ntBASIC5.28□□□□□ -1.56
C9orf72Q96LT7 AC007738.1-201ENST00000413892 348 ntBASIC5.28□□□□□ -1.56
C9orf72Q96LT7 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 AL139148.1-201ENST00000427122 680 ntBASIC5.28□□□□□ -1.56
C9orf72Q96LT7 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 GTF3AP5-201ENST00000442645 697 ntBASIC5.28□□□□□ -1.56
C9orf72Q96LT7 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 AC079841.1-201ENST00000481228 950 ntBASIC5.28□□□□□ -1.56
C9orf72Q96LT7 RPEP1-201ENST00000504507 658 ntBASIC5.28□□□□□ -1.56
C9orf72Q96LT7 AC112184.1-201ENST00000505179 312 ntBASIC5.28□□□□□ -1.56
C9orf72Q96LT7 AC093763.2-201ENST00000505334 1223 ntBASIC5.28□□□□□ -1.56
C9orf72Q96LT7 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 MIR4472-2-201ENST00000582069 67 ntBASIC5.28□□□□□ -1.56
C9orf72Q96LT7 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 BNIP3P35-201ENST00000604530 490 ntBASIC5.28□□□□□ -1.56
C9orf72Q96LT7 AL021707.7-201ENST00000607991 416 ntBASIC5.28□□□□□ -1.56
C9orf72Q96LT7 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 AC118658.2-201ENST00000618697 459 ntBASIC5.28□□□□□ -1.56
C9orf72Q96LT7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.28□□□□□ -1.56
C9orf72Q96LT7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
C9orf72Q96LT7 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.27□□□□□ -1.57
C9orf72Q96LT7 RNU1-74P-201ENST00000384108 171 ntBASIC5.27□□□□□ -1.57
C9orf72Q96LT7 RNA5SP339-201ENST00000390987 122 ntBASIC5.27□□□□□ -1.57
C9orf72Q96LT7 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
C9orf72Q96LT7 RPL10P10-201ENST00000403509 664 ntBASIC5.27□□□□□ -1.57
C9orf72Q96LT7 RNA5SP487-201ENST00000410186 122 ntBASIC5.27□□□□□ -1.57
C9orf72Q96LT7 NPM1P40-201ENST00000412758 733 ntBASIC5.27□□□□□ -1.57
C9orf72Q96LT7 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.27□□□□□ -1.57
C9orf72Q96LT7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.27□□□□□ -1.57
C9orf72Q96LT7 DSTNP5-201ENST00000427921 523 ntBASIC5.27□□□□□ -1.57
C9orf72Q96LT7 AL161722.2-201ENST00000434731 981 ntBASIC5.27□□□□□ -1.57
C9orf72Q96LT7 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.27□□□□□ -1.57
C9orf72Q96LT7 BTF3P6-201ENST00000448054 499 ntBASIC5.27□□□□□ -1.57
C9orf72Q96LT7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.27□□□□□ -1.57
C9orf72Q96LT7 SEPT7P3-201ENST00000455017 621 ntBASIC5.27□□□□□ -1.57
C9orf72Q96LT7 RNU7-157P-201ENST00000459600 66 ntBASIC5.27□□□□□ -1.57
C9orf72Q96LT7 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.27□□□□□ -1.57
C9orf72Q96LT7 AC091544.1-201ENST00000484702 348 ntBASIC5.27□□□□□ -1.57
C9orf72Q96LT7 AC072052.1-201ENST00000496556 306 ntBASIC5.27□□□□□ -1.57
C9orf72Q96LT7 OR5M14P-201ENST00000506803 618 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms