Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL451074.4-201ENST00000447545 470 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 PPP1R2P5-201ENST00000457256 603 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 RN7SL392P-201ENST00000473024 299 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 RN7SL569P-201ENST00000494652 288 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 HNRNPA1P44-201ENST00000503999 879 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 AC008945.1-201ENST00000505144 499 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 SMURF2P1-201ENST00000514992 481 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 AP002404.1-201ENST00000532005 451 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 AL049870.4-201ENST00000555741 486 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 AC026464.5-201ENST00000562497 722 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LRCH3Q96II8 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LRCH3Q96II8 MIR98-201ENST00000606724 119 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 AL161734.1-201ENST00000609720 557 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LRCH3Q96II8 AL157817.1-201ENST00000614264 790 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 AC244517.12-201ENST00000623581 663 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 SRP54-214ENST00000630962 162 ntTSL 5 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 AC135068.12-201ENST00000637370 931 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
LRCH3Q96II8 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 LRRC37A11P-202ENST00000579258 3717 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LRCH3Q96II8 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
LRCH3Q96II8 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 CD200-202ENST00000383681 1997 ntTSL 2 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 AL121835.2-201ENST00000624253 3502 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LRCH3Q96II8 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LRCH3Q96II8 AL031595.3-201ENST00000624919 14262 ntBASIC8.13□□□□□ -1.11
LRCH3Q96II8 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
LRCH3Q96II8 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LRCH3Q96II8 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC8.13□□□□□ -1.11
LRCH3Q96II8 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LRCH3Q96II8 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
LRCH3Q96II8 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LRCH3Q96II8 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LRCH3Q96II8 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 RN7SKP6-201ENST00000364795 319 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 SNORD3H-201ENST00000384486 214 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 AL589647.1-201ENST00000402485 466 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 AL353133.1-201ENST00000407695 401 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 RNU6-77P-201ENST00000410554 91 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 YWHAZP3-201ENST00000415292 738 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 RPSAP60-201ENST00000415403 880 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 PTPN2P1-201ENST00000423212 1072 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 RPL3P11-201ENST00000434028 1146 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 RPSAP40-201ENST00000442343 891 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 AL137792.2-201ENST00000443484 235 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 GCNT1P5-201ENST00000449274 682 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 OR9A3P-202ENST00000485185 878 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 AC015524.1-201ENST00000491585 472 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 RNA5SP216-201ENST00000516111 123 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 IGLVIV-64-201ENST00000518581 301 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 RPS20-202ENST00000518875 671 ntTSL 2 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 IGHVIII-25-1-201ENST00000522143 241 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 PCNAP4-201ENST00000532690 730 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 AC063952.1-203ENST00000634410 658 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 5S_rRNA.29-201ENST00000641250 107 ntBASIC8.12□□□□□ -1.11
LRCH3Q96II8 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LRCH3Q96II8 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LRCH3Q96II8 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
LRCH3Q96II8 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LRCH3Q96II8 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LRCH3Q96II8 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LRCH3Q96II8 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC8.11□□□□□ -1.11
LRCH3Q96II8 ZNF812P-201ENST00000457674 1694 ntBASIC8.11□□□□□ -1.11
LRCH3Q96II8 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms