Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 BRD7P6-201ENST00000431406 1860 ntBASIC8.24□□□□□ -1.09
TOPBP1Q92547 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.24□□□□□ -1.09
TOPBP1Q92547 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TOPBP1Q92547 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
TOPBP1Q92547 RNA5SP223-201ENST00000365174 120 ntBASIC8.24□□□□□ -1.09
TOPBP1Q92547 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC8.24□□□□□ -1.09
TOPBP1Q92547 RPL34P27-201ENST00000428810 349 ntBASIC8.24□□□□□ -1.09
TOPBP1Q92547 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC8.24□□□□□ -1.09
TOPBP1Q92547 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC8.24□□□□□ -1.09
TOPBP1Q92547 SCAND3P1-201ENST00000439854 1060 ntBASIC8.24□□□□□ -1.09
TOPBP1Q92547 BX842559.2-201ENST00000451418 605 ntBASIC8.24□□□□□ -1.09
TOPBP1Q92547 FPGT-203ENST00000467578 601 ntTSL 2 BASIC8.24□□□□□ -1.09
TOPBP1Q92547 AC091167.1-201ENST00000492017 396 ntBASIC8.24□□□□□ -1.09
TOPBP1Q92547 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC8.24□□□□□ -1.09
TOPBP1Q92547 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC8.24□□□□□ -1.09
TOPBP1Q92547 AP001804.1-201ENST00000526868 919 ntBASIC8.24□□□□□ -1.09
TOPBP1Q92547 AP001781.1-201ENST00000530977 207 ntBASIC8.24□□□□□ -1.09
TOPBP1Q92547 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC8.24□□□□□ -1.09
TOPBP1Q92547 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC8.24□□□□□ -1.09
TOPBP1Q92547 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC8.24□□□□□ -1.09
TOPBP1Q92547 AC010632.3-201ENST00000611377 369 ntBASIC8.24□□□□□ -1.09
TOPBP1Q92547 NRK-204ENST00000540278 1687 ntTSL 2 BASIC8.24□□□□□ -1.09
TOPBP1Q92547 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
TOPBP1Q92547 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
TOPBP1Q92547 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TOPBP1Q92547 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TOPBP1Q92547 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
TOPBP1Q92547 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC8.23□□□□□ -1.09
TOPBP1Q92547 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC8.23□□□□□ -1.09
TOPBP1Q92547 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TOPBP1Q92547 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC8.23□□□□□ -1.09
TOPBP1Q92547 TRGV7-201ENST00000427089 353 ntBASIC8.23□□□□□ -1.09
TOPBP1Q92547 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC8.23□□□□□ -1.09
TOPBP1Q92547 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC8.23□□□□□ -1.09
TOPBP1Q92547 CREM-230ENST00000474931 626 ntTSL 2 BASIC8.23□□□□□ -1.09
TOPBP1Q92547 AC020593.1-201ENST00000507399 299 ntBASIC8.23□□□□□ -1.09
TOPBP1Q92547 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TOPBP1Q92547 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC8.23□□□□□ -1.09
TOPBP1Q92547 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC8.23□□□□□ -1.09
TOPBP1Q92547 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC8.23□□□□□ -1.09
TOPBP1Q92547 MIR5699-201ENST00000578903 90 ntBASIC8.23□□□□□ -1.09
TOPBP1Q92547 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TOPBP1Q92547 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
TOPBP1Q92547 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
TOPBP1Q92547 STK3-216ENST00000523601 3107 ntTSL 2 BASIC8.22□□□□□ -1.09
TOPBP1Q92547 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC8.22□□□□□ -1.09
TOPBP1Q92547 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC8.22□□□□□ -1.09
TOPBP1Q92547 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TOPBP1Q92547 SMG1P6-201ENST00000532337 2930 ntBASIC8.22□□□□□ -1.09
TOPBP1Q92547 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TOPBP1Q92547 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
TOPBP1Q92547 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
TOPBP1Q92547 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC8.22□□□□□ -1.09
TOPBP1Q92547 OR4K17-201ENST00000315543 1032 ntBASIC8.22□□□□□ -1.09
TOPBP1Q92547 BMS1P19-201ENST00000433925 393 ntBASIC8.22□□□□□ -1.09
TOPBP1Q92547 ARL1-211ENST00000551828 776 ntTSL 5 BASIC8.22□□□□□ -1.09
TOPBP1Q92547 AL049839.1-201ENST00000556151 657 ntBASIC8.22□□□□□ -1.09
TOPBP1Q92547 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC8.22□□□□□ -1.09
TOPBP1Q92547 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC8.22□□□□□ -1.09
TOPBP1Q92547 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC8.22□□□□□ -1.09
TOPBP1Q92547 DLEU1_1.1-201ENST00000618107 190 ntBASIC8.22□□□□□ -1.09
TOPBP1Q92547 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TOPBP1Q92547 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC8.22□□□□□ -1.09
TOPBP1Q92547 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TOPBP1Q92547 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC8.22□□□□□ -1.09
TOPBP1Q92547 DMD-202ENST00000343523 5623 ntTSL 5 BASIC8.22□□□□□ -1.09
TOPBP1Q92547 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
TOPBP1Q92547 SAMMSON-210ENST00000641260 1308 ntBASIC8.21□□□□□ -1.09
TOPBP1Q92547 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
TOPBP1Q92547 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC8.21□□□□□ -1.09
TOPBP1Q92547 AC093671.1-201ENST00000624981 2929 ntBASIC8.21□□□□□ -1.1
TOPBP1Q92547 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
TOPBP1Q92547 AC097523.2-201ENST00000435551 652 ntBASIC8.21□□□□□ -1.1
TOPBP1Q92547 AL450023.3-201ENST00000440592 271 ntBASIC8.21□□□□□ -1.1
TOPBP1Q92547 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC8.21□□□□□ -1.1
TOPBP1Q92547 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC8.21□□□□□ -1.1
TOPBP1Q92547 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC8.21□□□□□ -1.1
TOPBP1Q92547 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC8.21□□□□□ -1.1
TOPBP1Q92547 AC012409.3-201ENST00000611343 981 ntBASIC8.21□□□□□ -1.1
TOPBP1Q92547 OR8B1P-202ENST00000641132 1178 ntBASIC8.21□□□□□ -1.1
TOPBP1Q92547 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
TOPBP1Q92547 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
TOPBP1Q92547 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TOPBP1Q92547 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
TOPBP1Q92547 RAD17P1-201ENST00000418130 2042 ntBASIC8.21□□□□□ -1.1
TOPBP1Q92547 AC120338.1-201ENST00000625074 1541 ntBASIC8.21□□□□□ -1.1
TOPBP1Q92547 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
TOPBP1Q92547 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
TOPBP1Q92547 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TOPBP1Q92547 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
TOPBP1Q92547 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
TOPBP1Q92547 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
TOPBP1Q92547 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC8.2□□□□□ -1.1
TOPBP1Q92547 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TOPBP1Q92547 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC8.2□□□□□ -1.1
TOPBP1Q92547 AC022034.3-201ENST00000471393 478 ntBASIC8.2□□□□□ -1.1
TOPBP1Q92547 AC007016.1-201ENST00000512110 244 ntBASIC8.2□□□□□ -1.1
TOPBP1Q92547 MTCO1P35-201ENST00000515270 228 ntBASIC8.2□□□□□ -1.1
TOPBP1Q92547 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC8.2□□□□□ -1.1
TOPBP1Q92547 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms