Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 OR4K17-201ENST00000315543 1032 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 RNU6-609P-201ENST00000365459 107 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 AC005042.1-201ENST00000393397 800 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 AC104297.1-201ENST00000393779 870 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 RPL21P67-201ENST00000402896 478 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 CTSL3P-202ENST00000412179 788 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 AC013410.2-201ENST00000422627 201 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 GAPDHP48-201ENST00000436626 961 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 IGBP1P3-201ENST00000447449 1000 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 CFL1P4-201ENST00000451536 498 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 MYL12BP2-201ENST00000503948 512 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 RNU6-513P-201ENST00000516104 104 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 RN7SKP183-201ENST00000517169 324 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 LSM3P2-201ENST00000551246 273 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 AC025918.2-201ENST00000558683 763 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 AC002310.3-201ENST00000569728 723 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 MIR6793-201ENST00000612376 63 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 MT-RNR2-201ENST00000387347 1559 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC107Q8WV48 ADAM5-202ENST00000399789 1942 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 TRIM51GP-201ENST00000534741 1350 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 AC068870.1-201ENST00000563737 2455 ntBASIC4.78□□□□□ -1.64
CCDC107Q8WV48 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AL078621.3-201ENST00000623707 2042 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 NXF4-202ENST00000416098 1465 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 RNU6-252P-201ENST00000363232 107 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 RNU1-65P-201ENST00000363919 148 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 RNU6-1005P-201ENST00000384519 107 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 RNU6-796P-201ENST00000391086 107 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AL136131.1-201ENST00000406079 803 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AL034374.1-201ENST00000406329 351 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AC010385.1-201ENST00000412374 256 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 RIMKLBP2-201ENST00000424737 654 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AL158053.1-201ENST00000441503 453 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AC016772.1-201ENST00000444170 1261 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 YRDCP3-201ENST00000456507 480 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 RPL5P22-201ENST00000480199 884 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 SYT14P1-201ENST00000481459 721 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 RPL32P33-201ENST00000487023 394 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AC016550.1-201ENST00000505348 785 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AC016559.2-201ENST00000510759 359 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AC011853.1-201ENST00000518911 454 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC107Q8WV48 SOX5P1-201ENST00000524155 1127 ntBASIC4.77□□□□□ -1.65
CCDC107Q8WV48 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms