Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AC020658.4-201ENST00000613987 684 ntBASIC5.5□□□□□ -1.53
TRAF3IP1Q8TDR0 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRAF3IP1Q8TDR0 AC126175.1-201ENST00000617041 758 ntBASIC5.5□□□□□ -1.53
TRAF3IP1Q8TDR0 AC138965.3-201ENST00000623875 498 ntBASIC5.5□□□□□ -1.53
TRAF3IP1Q8TDR0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRAF3IP1Q8TDR0 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.5□□□□□ -1.53
TRAF3IP1Q8TDR0 AC104623.2-202ENST00000623477 4002 ntBASIC5.5□□□□□ -1.53
TRAF3IP1Q8TDR0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRAF3IP1Q8TDR0 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRAF3IP1Q8TDR0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRAF3IP1Q8TDR0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRAF3IP1Q8TDR0 AC023421.1-201ENST00000590535 1785 ntBASIC5.5□□□□□ -1.53
TRAF3IP1Q8TDR0 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 RNA5SP223-201ENST00000365174 120 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 MIR7-1-201ENST00000384871 110 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 AC233289.1-201ENST00000403700 508 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 GABARAPL3-201ENST00000412799 354 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 AC007064.3-201ENST00000422608 359 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 GAPDHP58-201ENST00000438477 1006 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 AL591363.1-201ENST00000450091 483 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 RPL35AP19-201ENST00000469425 329 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 CBX1P5-201ENST00000475330 559 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 RN7SL466P-201ENST00000497546 295 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 MTATP6P1-201ENST00000514057 681 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 RFPL4AP5-201ENST00000514977 504 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 OR10D4P-201ENST00000525892 951 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 AC009852.2-201ENST00000567898 485 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 MTCYBP13-201ENST00000578634 1093 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 MIR6839-201ENST00000620425 113 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 FRG1EP-201ENST00000634469 770 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 SAMMSON-209ENST00000641222 1100 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 MAPK10-328ENST00000641553 4009 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 OR9K1P-202ENST00000641111 3217 ntBASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRAF3IP1Q8TDR0 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 OR9K1P-201ENST00000326513 941 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 RNU6-618P-201ENST00000363518 112 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 RNA5SP335-201ENST00000363817 110 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 MIR589-201ENST00000385238 99 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 SETP15-201ENST00000412724 337 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 AL161722.2-201ENST00000434731 981 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 RPL31P20-201ENST00000449593 360 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 GAPDHP14-201ENST00000450472 937 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 AC104634.1-201ENST00000452720 462 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 DNAJB5P1-201ENST00000454004 806 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 AL035090.1-201ENST00000454835 332 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 RN7SL189P-201ENST00000468631 289 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 RPL7AP10-201ENST00000481016 791 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 OR9N1P-201ENST00000491296 333 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 EIF3LP3-201ENST00000495197 822 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 AC016559.2-201ENST00000510759 359 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 EIF3KP3-201ENST00000514461 639 ntBASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.48□□□□□ -1.53
TRAF3IP1Q8TDR0 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms