Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 AP001284.1-201ENST00000528393 2118 ntBASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 MAX-203ENST00000341653 330 ntTSL 2 BASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 SNORA11F-201ENST00000408237 128 ntBASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 HNRNPA1P29-201ENST00000426409 879 ntBASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 CYCSP11-201ENST00000436426 315 ntBASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 NOP56P2-201ENST00000447491 769 ntBASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 RNU1-88P-201ENST00000459274 128 ntBASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 ARL6IP1P3-201ENST00000524544 560 ntBASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 BNIP3P5-201ENST00000562290 498 ntBASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 Xist_exon4.1-201ENST00000615964 126 ntBASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 AC009120.7-201ENST00000623452 780 ntBASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 AC008785.1-201ENST00000624475 456 ntBASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 SMG1P7-201ENST00000565246 2704 ntBASIC3.39□□□□□ -1.87
ALMS1Q8TCU4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC005261.6-201ENST00000623072 1387 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 SNORA71.3-201ENST00000362582 128 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 CRIP1P1-201ENST00000427567 185 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC108751.3-201ENST00000461814 1020 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 RNA5SP464-201ENST00000516251 108 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 RPL7P50-201ENST00000600588 727 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC002069.2-201ENST00000603580 883 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AL122126.1-201ENST00000546905 1318 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 OR51B3P-201ENST00000412287 913 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 RPS17P17-201ENST00000419392 409 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 KATNBL1P2-201ENST00000433311 835 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AL691482.1-201ENST00000453255 87 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC012123.2-201ENST00000485809 248 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC007016.1-201ENST00000512110 244 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 RNA5SP143-201ENST00000516936 115 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC007224.1-201ENST00000564410 144 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC025857.2-201ENST00000602711 238 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC108738.1-201ENST00000603703 237 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 UGP2-232ENST00000640075 567 ntTSL 5 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC120338.1-201ENST00000625074 1541 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 DMD-222ENST00000474231 5209 ntTSL 5 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC079097.1-201ENST00000512187 1399 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC092376.2-201ENST00000622621 4116 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AL445189.1-201ENST00000405722 338 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 MTND2P40-201ENST00000436718 841 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AP002812.1-201ENST00000495378 474 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC006133.1-201ENST00000617106 264 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 ZYXP1-201ENST00000617638 118 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC002044.3-201ENST00000623314 541 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 AC063952.1-203ENST00000634410 658 ntBASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
ALMS1Q8TCU4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms