Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SLC20A1P1-201ENST00000413906 956 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 LIPT1P1-201ENST00000415870 1186 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC090960.1-201ENST00000421072 306 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 HIGD1AP4-201ENST00000430194 280 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 USP9YP24-201ENST00000434374 697 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 CR769776.1-201ENST00000441254 787 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 RPS27P5-201ENST00000444247 244 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 USP9YP17-201ENST00000444617 696 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AL355032.1-201ENST00000472981 438 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC037198.2-201ENST00000478845 733 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC107398.1-201ENST00000486904 505 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC091874.2-201ENST00000505889 720 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC021193.1-201ENST00000511607 420 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 SCARNA21.2-201ENST00000516600 166 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC010476.1-201ENST00000519111 851 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC136777.2-201ENST00000522979 358 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 NPIPB14P-203ENST00000532298 987 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AP002373.2-201ENST00000541631 1060 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 MIR4701-201ENST00000583094 63 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC010487.1-201ENST00000594408 1172 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 VN1R78P-201ENST00000597393 564 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 Z99497.2-201ENST00000603634 310 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC008555.7-201ENST00000605008 583 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC024023.1-201ENST00000624530 922 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC092184.1-201ENST00000625042 715 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 BX649567.1-201ENST00000642071 1134 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 AC093775.1-201ENST00000624154 1868 ntBASIC5.75□□□□□ -1.49
SIMC1Q8NDZ2 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 AP001284.1-201ENST00000528393 2118 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 RNU6-532P-201ENST00000384318 107 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 AL139805.1-201ENST00000407837 289 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 RPS24P7-201ENST00000416921 246 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 AC099782.1-201ENST00000425889 474 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 MGAT2P2-201ENST00000427194 797 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 RPL34P26-201ENST00000445636 354 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 HMGB1P5-202ENST00000451497 985 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 NAP1L1P3-201ENST00000462291 880 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 OR7E99P-201ENST00000505750 922 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 IMPA1P1-201ENST00000510718 842 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 ASNSP4-201ENST00000511103 447 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 RNA5SP434-201ENST00000516647 121 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 MRPS36P3-201ENST00000519284 130 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 HIGD1AP18-201ENST00000520730 278 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 BUD31P1-201ENST00000521828 359 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 AC090819.1-201ENST00000523800 1111 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 AC027369.2-201ENST00000528030 440 ntBASIC5.74□□□□□ -1.49
SIMC1Q8NDZ2 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms