Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC027575.3-201ENST00000583058 2747 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC015689.2-201ENST00000528172 1738 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 Y_RNA.516-201ENST00000384541 124 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 MTCYBP38-201ENST00000417160 1123 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AL009174.1-201ENST00000426577 416 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 RPL21P110-201ENST00000433345 446 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 PPIAP17-201ENST00000438507 471 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 CACYBPP1-201ENST00000438592 684 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 RPL23AP35-201ENST00000451906 501 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 RPL5P33-201ENST00000487833 905 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC113191.1-201ENST00000517759 403 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 CARSP2-201ENST00000520688 277 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 PPIAP6-201ENST00000557078 499 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 GTF2IP8-201ENST00000560687 584 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC136619.2-201ENST00000563361 631 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC087481.2-201ENST00000565492 330 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 MIR5010-201ENST00000582846 120 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC093765.1-201ENST00000603758 881 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 MTCYBP22-201ENST00000603788 447 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AP001596.2-201ENST00000608410 312 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC091768.1-201ENST00000609258 930 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC012360.2-201ENST00000609349 391 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC138749.5-201ENST00000611461 208 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC025594.3-201ENST00000613068 790 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 MIR7844-201ENST00000616161 122 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AC087565.3-203ENST00000641018 837 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 ANKRD36BP1-202ENST00000604892 1417 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 DCAF13P3-201ENST00000561147 1334 ntBASIC6.74□□□□□ -1.33
PHC3Q8NDX5 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PHC3Q8NDX5 AL121950.1-201ENST00000624993 2077 ntBASIC6.73□□□□□ -1.33
PHC3Q8NDX5 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 AC007996.1-201ENST00000620414 2821 ntBASIC6.73□□□□□ -1.33
PHC3Q8NDX5 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 HSPD1P9-201ENST00000420325 1636 ntBASIC6.73□□□□□ -1.33
PHC3Q8NDX5 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 SNORA62.2-201ENST00000364672 152 ntBASIC6.73□□□□□ -1.33
PHC3Q8NDX5 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 MTND1P23-201ENST00000416931 372 ntBASIC6.73□□□□□ -1.33
PHC3Q8NDX5 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 HMGB3P10-201ENST00000434734 572 ntBASIC6.73□□□□□ -1.33
PHC3Q8NDX5 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 HMGN1P32-201ENST00000441744 256 ntBASIC6.73□□□□□ -1.33
PHC3Q8NDX5 AL353572.1-201ENST00000442490 417 ntBASIC6.73□□□□□ -1.33
PHC3Q8NDX5 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 GOT2P2-201ENST00000450663 1251 ntBASIC6.73□□□□□ -1.33
PHC3Q8NDX5 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.73□□□□□ -1.33
PHC3Q8NDX5 ZNF114P1-201ENST00000453500 292 ntBASIC6.73□□□□□ -1.33
PHC3Q8NDX5 SNRPGP9-201ENST00000456025 225 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms