Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNU1-150P-201ENST00000362491 162 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 RN7SKP28-201ENST00000364770 305 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AC019155.1-201ENST00000382242 574 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 NCSTNP1-201ENST00000406229 144 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 HMGB3P10-201ENST00000434734 572 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 RPL35AP21-201ENST00000437667 333 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 RPL10P17-201ENST00000453852 316 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 HMGN1P8-201ENST00000463578 288 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 UBA52P3-201ENST00000491303 382 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 OR52A4P-203ENST00000498233 1014 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AC106822.1-201ENST00000502647 526 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 HMGB3P16-201ENST00000508037 287 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 HMGB1P44-201ENST00000508597 572 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 RN7SKP99-201ENST00000517028 307 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 NPM1P6-201ENST00000521088 871 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AC005000.1-201ENST00000536192 288 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 CYCSP38-201ENST00000559840 322 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 DPPA2P4-201ENST00000563717 878 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AC015802.2-201ENST00000589690 189 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 FAM60CP-201ENST00000591086 664 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AC012616.1-201ENST00000600294 197 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AC005252.1-201ENST00000604518 1063 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AC011626.1-201ENST00000604710 562 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 TAS2R6P-201ENST00000605022 826 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AC015914.2-201ENST00000618167 288 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 LINC01355-201ENST00000566551 5444 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 AC063976.2-201ENST00000425667 3556 ntBASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC71LQ8N9Z2 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 RNA5SP273-201ENST00000362484 113 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 RNU4-23P-201ENST00000362839 140 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 RNU4-2-201ENST00000365668 141 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AC013429.2-201ENST00000418798 781 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 NAP1L4P2-201ENST00000425958 899 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AC127526.2-201ENST00000426436 775 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 KCTD9P1-201ENST00000430462 1167 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 KF459542.1-201ENST00000450908 553 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AL356390.1-201ENST00000455684 397 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 RPS23P6-201ENST00000466136 431 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 RN7SL423P-201ENST00000486202 304 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AC018797.1-201ENST00000510791 255 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AP003033.2-201ENST00000528901 805 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms