Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC060775.1-201ENST00000518241 520 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VRK3Q8IV63 HMGB1P1-201ENST00000522557 636 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC079064.1-201ENST00000528365 362 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 OR4A6P-201ENST00000534364 970 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC005000.1-201ENST00000536192 288 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VRK3Q8IV63 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC079315.1-201ENST00000602952 623 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 AL138895.2-201ENST00000603019 178 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC079610.2-201ENST00000604818 690 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC092354.2-201ENST00000607786 514 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC104073.3-201ENST00000610942 955 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 AL139099.4-201ENST00000614802 114 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC084035.1-201ENST00000634543 607 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VRK3Q8IV63 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 ELL2P3-201ENST00000457883 1602 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.73□□□□□ -1.49
VRK3Q8IV63 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
VRK3Q8IV63 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.73□□□□□ -1.49
VRK3Q8IV63 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VRK3Q8IV63 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 MFSD8-239ENST00000641590 2479 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 RN7SKP78-201ENST00000364711 318 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 RNU6-1242P-201ENST00000391052 103 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 AL355379.1-201ENST00000405542 640 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 Z86062.1-201ENST00000406773 777 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 AL513175.2-201ENST00000422071 443 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC073410.1-201ENST00000435125 589 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 NPM1P33-201ENST00000438918 872 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 AL445567.1-201ENST00000439121 144 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 AL138899.2-201ENST00000439139 499 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 RPL5P10-201ENST00000445207 894 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 NDUFA5P5-201ENST00000468361 342 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC006539.1-201ENST00000481419 501 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC034244.1-201ENST00000507687 207 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC093752.1-206ENST00000511823 336 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 MTCO2P32-201ENST00000514865 403 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 snoU109.5-201ENST00000516231 132 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 RN7SKP70-201ENST00000516655 271 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 NANOGNBP2-201ENST00000544753 553 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC005726.4-201ENST00000582858 458 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 VIS1.1-201ENST00000610517 203 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 PART1_2.1-201ENST00000612397 250 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC131159.1-201ENST00000621854 213 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.72□□□□□ -1.49
VRK3Q8IV63 AL390318.1-201ENST00000624564 687 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC129915.3-201ENST00000634128 948 ntBASIC5.72□□□□□ -1.49
VRK3Q8IV63 AC090582.1-201ENST00000636321 199 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms