Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AC000123.3-201ENST00000624029 4975 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AC019155.1-201ENST00000382242 574 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AC003045.1-201ENST00000398779 713 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 RPS20P25-201ENST00000412447 352 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 RANP4-201ENST00000413361 655 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 Z95327.2-201ENST00000414579 1873 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 OR13Z1P-201ENST00000416141 834 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AC019050.1-201ENST00000418508 492 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 DPY19L1P2-201ENST00000426647 915 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AL590623.1-201ENST00000427864 105 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AL445928.1-201ENST00000435545 222 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AC092601.1-201ENST00000444526 383 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 NDUFA5P8-201ENST00000449019 346 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 APOOP2-201ENST00000461561 539 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 SUMO1P1-201ENST00000497904 306 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 HMGB1P47-201ENST00000511281 589 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 GAPDHP71-201ENST00000511530 1003 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AC138517.1-201ENST00000515724 568 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 RNU6-889P-201ENST00000517189 103 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 HMGB1P19-201ENST00000517578 577 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 HIGD1AP18-201ENST00000520730 278 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 MTCO3P22-201ENST00000603219 784 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AL645933.2-201ENST00000606743 1207 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AL139099.4-201ENST00000614802 114 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AC211486.4-201ENST00000621495 113 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AC079298.2-201ENST00000623885 459 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 AL139254.3-201ENST00000641097 674 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 CASC19-222ENST00000641321 1173 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 OR5AC4P-202ENST00000642086 985 ntBASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
KCNIP4Q6PIL6 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 SNORA27.3-201ENST00000364937 134 ntBASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 MIR191-201ENST00000384873 92 ntBASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 MIR92A2-201ENST00000385299 75 ntBASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 AL139805.1-201ENST00000407837 289 ntBASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 TRGV6-201ENST00000417928 299 ntBASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 RPL35AP31-201ENST00000418340 337 ntBASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 RPL36AP10-201ENST00000421785 322 ntBASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 AC130360.1-201ENST00000425489 1117 ntBASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 RPS26P4-201ENST00000431743 355 ntBASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 AC010086.1-201ENST00000437359 1052 ntBASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 AC007383.1-201ENST00000445875 636 ntBASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 ZNF619P1-201ENST00000446539 752 ntBASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 DUTP1-201ENST00000493631 470 ntBASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 RPS24P16-201ENST00000497294 392 ntBASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 IGBP1P4-201ENST00000503202 879 ntBASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 SNX18P25-201ENST00000510539 758 ntBASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 HMGN1P9-201ENST00000515212 298 ntBASIC4.24□□□□□ -1.73
KCNIP4Q6PIL6 SNORA74.1-201ENST00000516320 180 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms