Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC017099.1-201ENST00000448261 1028 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 RN7SL188P-201ENST00000469842 285 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 AC105918.1-201ENST00000474399 838 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 OR7E10P-201ENST00000526420 991 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 MIR4697-201ENST00000582977 78 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 AP000769.2-201ENST00000602344 396 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 UGT2B24P-201ENST00000514441 1597 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 OR13C3-201ENST00000374781 1108 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 SNORD56.6-201ENST00000384569 71 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 NUDT19P3-201ENST00000404698 555 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 OR2AM1P-201ENST00000422137 422 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 EIF2S2P3-201ENST00000428356 999 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 AL138787.1-202ENST00000437804 898 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 PRPF38AP2-201ENST00000438179 851 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 ARAFP2-201ENST00000440565 559 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 AL606490.8-201ENST00000441624 319 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 PDCL3P4-201ENST00000489621 720 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 RN7SKP34-201ENST00000516142 244 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 RAB9BP1-201ENST00000519581 626 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 AC003001.2-201ENST00000616294 831 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 AC135068.12-201ENST00000637370 931 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 AC114774.1-201ENST00000507410 1770 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 NLRP3P1-201ENST00000622303 1785 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 AL158152.1-201ENST00000602652 1435 ntBASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LYSMD4Q5XG99 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 NXF4-202ENST00000416098 1465 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 RNU1-146P-201ENST00000364015 165 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 DBIP1-201ENST00000401435 260 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 AL512504.1-201ENST00000415494 778 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 AL590139.1-201ENST00000416267 400 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 NPM1P26-201ENST00000426339 738 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 USP24P1-201ENST00000433802 779 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 AC008072.1-201ENST00000434254 824 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 MRPS21P3-201ENST00000436696 262 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 AL138878.2-201ENST00000440581 1241 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms