Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CBX1P1-201ENST00000440184 427 ntBASIC4.43□□□□□ -1.7
LRRK2Q5S007 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LRRK2Q5S007 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.43□□□□□ -1.7
LRRK2Q5S007 RNA5SP392-201ENST00000516905 112 ntBASIC4.43□□□□□ -1.7
LRRK2Q5S007 RNU1-45P-201ENST00000517191 141 ntBASIC4.43□□□□□ -1.7
LRRK2Q5S007 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.43□□□□□ -1.7
LRRK2Q5S007 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRRK2Q5S007 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.43□□□□□ -1.7
LRRK2Q5S007 AP000843.1-201ENST00000624880 701 ntBASIC4.43□□□□□ -1.7
LRRK2Q5S007 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.43□□□□□ -1.7
LRRK2Q5S007 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC4.43□□□□□ -1.7
LRRK2Q5S007 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRRK2Q5S007 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRRK2Q5S007 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LRRK2Q5S007 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRRK2Q5S007 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LRRK2Q5S007 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRRK2Q5S007 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.43□□□□□ -1.7
LRRK2Q5S007 MAPK10-270ENST00000641102 3538 ntBASIC4.43□□□□□ -1.7
LRRK2Q5S007 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRRK2Q5S007 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRRK2Q5S007 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LRRK2Q5S007 RNA5SP509-201ENST00000364577 119 ntBASIC4.42□□□□□ -1.7
LRRK2Q5S007 RNU1-74P-201ENST00000384108 171 ntBASIC4.42□□□□□ -1.7
LRRK2Q5S007 Z97832.1-201ENST00000402490 328 ntBASIC4.42□□□□□ -1.7
LRRK2Q5S007 AL358176.3-201ENST00000420757 454 ntBASIC4.42□□□□□ -1.7
LRRK2Q5S007 AC007568.1-201ENST00000422912 471 ntBASIC4.42□□□□□ -1.7
LRRK2Q5S007 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 PHBP16-201ENST00000446318 950 ntBASIC4.42□□□□□ -1.7
LRRK2Q5S007 AC010350.1-201ENST00000504908 231 ntBASIC4.42□□□□□ -1.7
LRRK2Q5S007 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRRK2Q5S007 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LRRK2Q5S007 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LRRK2Q5S007 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRRK2Q5S007 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRRK2Q5S007 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 RBPJP2-201ENST00000618187 1444 ntBASIC4.42□□□□□ -1.7
LRRK2Q5S007 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRRK2Q5S007 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 HYALP1-201ENST00000417674 1279 ntBASIC4.42□□□□□ -1.7
LRRK2Q5S007 AL161722.2-201ENST00000434731 981 ntBASIC4.42□□□□□ -1.7
LRRK2Q5S007 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.42□□□□□ -1.7
LRRK2Q5S007 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 AC008782.1-201ENST00000603386 430 ntBASIC4.42□□□□□ -1.7
LRRK2Q5S007 AL121890.2-201ENST00000617644 465 ntBASIC4.42□□□□□ -1.7
LRRK2Q5S007 MIR8089-201ENST00000620165 82 ntBASIC4.42□□□□□ -1.7
LRRK2Q5S007 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 AC108751.5-201ENST00000492880 1336 ntBASIC4.42□□□□□ -1.7
LRRK2Q5S007 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LRRK2Q5S007 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
LRRK2Q5S007 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LRRK2Q5S007 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRRK2Q5S007 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRRK2Q5S007 AC239868.2-201ENST00000564237 4527 ntBASIC4.41□□□□□ -1.7
LRRK2Q5S007 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRRK2Q5S007 RNU1-94P-201ENST00000362627 173 ntBASIC4.41□□□□□ -1.7
LRRK2Q5S007 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 RIMKLBP2-201ENST00000424737 654 ntBASIC4.41□□□□□ -1.7
LRRK2Q5S007 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 CEACAMP6-201ENST00000452007 574 ntBASIC4.41□□□□□ -1.7
LRRK2Q5S007 CYCSP34-201ENST00000458172 304 ntBASIC4.41□□□□□ -1.7
LRRK2Q5S007 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRRK2Q5S007 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LRRK2Q5S007 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LRRK2Q5S007 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRRK2Q5S007 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LRRK2Q5S007 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRRK2Q5S007 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRRK2Q5S007 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LRRK2Q5S007 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 ATP5F1P3-201ENST00000397213 657 ntBASIC4.41□□□□□ -1.7
LRRK2Q5S007 GTF2IP5-201ENST00000414608 731 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms