Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 MFSD8-216ENST00000641147 4009 ntBASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 AC079298.1-201ENST00000625026 1619 ntBASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 OR9G4-201ENST00000302957 984 ntBASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 PTP4A1P1-201ENST00000420539 515 ntBASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 AC004074.1-201ENST00000421810 1063 ntBASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 HMGB1P32-201ENST00000425971 565 ntBASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 AL359265.1-201ENST00000440296 795 ntBASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 CEACAMP9-201ENST00000442990 513 ntBASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 RN7SL459P-201ENST00000481078 302 ntBASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 OR7E128P-201ENST00000532736 1024 ntBASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 AC008745.1-201ENST00000604064 271 ntBASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 AC010632.3-201ENST00000611377 369 ntBASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 AL356752.1-201ENST00000615844 593 ntBASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM1Q2M3G4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 RN7SKP149-201ENST00000363008 344 ntBASIC6□□□□□ -1.45
SHROOM1Q2M3G4 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 GAPDHP15-201ENST00000398586 975 ntBASIC6□□□□□ -1.45
SHROOM1Q2M3G4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 IGHV5-78-201ENST00000450948 295 ntBASIC6□□□□□ -1.45
SHROOM1Q2M3G4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 AC009220.1-201ENST00000451614 275 ntBASIC6□□□□□ -1.45
SHROOM1Q2M3G4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 AC140172.1-201ENST00000502928 141 ntBASIC6□□□□□ -1.45
SHROOM1Q2M3G4 USP9YP2-201ENST00000504503 1000 ntBASIC6□□□□□ -1.45
SHROOM1Q2M3G4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 COX6B1P5-201ENST00000509843 249 ntBASIC6□□□□□ -1.45
SHROOM1Q2M3G4 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 USP9YP1-201ENST00000513521 1002 ntBASIC6□□□□□ -1.45
SHROOM1Q2M3G4 CR383656.6-201ENST00000550518 394 ntBASIC6□□□□□ -1.45
SHROOM1Q2M3G4 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 BNIP3P35-201ENST00000604530 490 ntBASIC6□□□□□ -1.45
SHROOM1Q2M3G4 MIR6133-201ENST00000617057 108 ntBASIC6□□□□□ -1.45
SHROOM1Q2M3G4 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 AC074140.1-201ENST00000621617 208 ntBASIC6□□□□□ -1.45
SHROOM1Q2M3G4 uc_338.7-201ENST00000621834 124 ntBASIC6□□□□□ -1.45
SHROOM1Q2M3G4 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6□□□□□ -1.45
SHROOM1Q2M3G4 EEF1A1P36-201ENST00000427807 1351 ntBASIC6□□□□□ -1.45
SHROOM1Q2M3G4 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 DPY19L2P2-203ENST00000435536 1858 ntBASIC6□□□□□ -1.45
SHROOM1Q2M3G4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHROOM1Q2M3G4 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 AC027228.2-201ENST00000567141 2154 ntBASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 AC019072.1-201ENST00000604535 1551 ntBASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 AC012618.3-205ENST00000637896 1496 ntBASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 OR8V1P-201ENST00000395193 873 ntBASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 RPL7P11-201ENST00000437586 658 ntBASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.99□□□□□ -1.45
SHROOM1Q2M3G4 AC112498.1-201ENST00000444401 332 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms