Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC3.9□□□□□ -1.79
CCL20P78556 OR5H7P-201ENST00000514084 930 ntBASIC3.9□□□□□ -1.79
CCL20P78556 RFPL4AP5-201ENST00000514977 504 ntBASIC3.9□□□□□ -1.79
CCL20P78556 SNORA70.20-201ENST00000516848 126 ntBASIC3.9□□□□□ -1.79
CCL20P78556 SNORA43.3-201ENST00000517240 103 ntBASIC3.9□□□□□ -1.79
CCL20P78556 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC3.9□□□□□ -1.79
CCL20P78556 AC022882.1-201ENST00000532142 501 ntBASIC3.9□□□□□ -1.79
CCL20P78556 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
CCL20P78556 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.9□□□□□ -1.79
CCL20P78556 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.9□□□□□ -1.79
CCL20P78556 MED21-206ENST00000546323 575 ntTSL 3 BASIC3.9□□□□□ -1.79
CCL20P78556 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.9□□□□□ -1.79
CCL20P78556 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC3.9□□□□□ -1.79
CCL20P78556 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.9□□□□□ -1.79
CCL20P78556 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CCL20P78556 APOC2-205ENST00000592257 444 ntTSL 3 BASIC3.9□□□□□ -1.79
CCL20P78556 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC3.9□□□□□ -1.79
CCL20P78556 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC3.9□□□□□ -1.79
CCL20P78556 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC3.9□□□□□ -1.79
CCL20P78556 AC055839.1-201ENST00000634467 498 ntBASIC3.9□□□□□ -1.79
CCL20P78556 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.79
CCL20P78556 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CCL20P78556 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCL20P78556 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCL20P78556 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCL20P78556 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCL20P78556 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCL20P78556 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCL20P78556 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.89□□□□□ -1.79
CCL20P78556 AC068254.2-201ENST00000623938 3577 ntBASIC3.89□□□□□ -1.79
CCL20P78556 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCL20P78556 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCL20P78556 OR56A4-201ENST00000330728 1209 ntBASIC3.89□□□□□ -1.79
CCL20P78556 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCL20P78556 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.89□□□□□ -1.79
CCL20P78556 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC3.89□□□□□ -1.79
CCL20P78556 CEACAMP8-201ENST00000413902 580 ntBASIC3.89□□□□□ -1.79
CCL20P78556 AC013268.2-201ENST00000420753 337 ntBASIC3.89□□□□□ -1.79
CCL20P78556 OR2X1P-201ENST00000421144 687 ntBASIC3.89□□□□□ -1.79
CCL20P78556 EIF4A1P7-201ENST00000421800 1220 ntBASIC3.89□□□□□ -1.79
CCL20P78556 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC3.89□□□□□ -1.79
CCL20P78556 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.89□□□□□ -1.79
CCL20P78556 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC3.89□□□□□ -1.79
CCL20P78556 RPSAP32-201ENST00000432681 526 ntBASIC3.89□□□□□ -1.79
CCL20P78556 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.89□□□□□ -1.79
CCL20P78556 AL645937.3-201ENST00000453647 936 ntBASIC3.89□□□□□ -1.79
CCL20P78556 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.89□□□□□ -1.79
CCL20P78556 SSR3-206ENST00000476217 807 ntTSL 3 BASIC3.89□□□□□ -1.79
CCL20P78556 MTCO1P55-201ENST00000489829 745 ntBASIC3.89□□□□□ -1.79
CCL20P78556 EIF4E2P2-201ENST00000492033 736 ntBASIC3.89□□□□□ -1.79
CCL20P78556 AC104971.1-201ENST00000495117 578 ntBASIC3.89□□□□□ -1.79
CCL20P78556 CBX1-205ENST00000495350 550 ntTSL 2 BASIC3.89□□□□□ -1.79
CCL20P78556 AC093325.1-201ENST00000508378 326 ntBASIC3.89□□□□□ -1.79
CCL20P78556 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC3.89□□□□□ -1.79
CCL20P78556 AL671862.1-201ENST00000515851 349 ntBASIC3.89□□□□□ -1.79
CCL20P78556 AC026688.1-201ENST00000520639 1168 ntBASIC3.89□□□□□ -1.79
CCL20P78556 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC3.89□□□□□ -1.79
CCL20P78556 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.89□□□□□ -1.79
CCL20P78556 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC3.89□□□□□ -1.79
CCL20P78556 AL358913.1-201ENST00000554342 121 ntBASIC3.89□□□□□ -1.79
CCL20P78556 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CCL20P78556 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC3.89□□□□□ -1.79
CCL20P78556 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.89□□□□□ -1.79
CCL20P78556 COX6CP4-201ENST00000605798 228 ntBASIC3.89□□□□□ -1.79
CCL20P78556 AP001437.1-201ENST00000608783 456 ntBASIC3.89□□□□□ -1.79
CCL20P78556 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC3.89□□□□□ -1.79
CCL20P78556 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCL20P78556 AC132068.1-201ENST00000623805 459 ntBASIC3.89□□□□□ -1.79
CCL20P78556 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC3.89□□□□□ -1.79
CCL20P78556 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
CCL20P78556 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCL20P78556 AC138627.1-204ENST00000641894 765 ntBASIC3.89□□□□□ -1.79
CCL20P78556 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.89□□□□□ -1.79
CCL20P78556 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCL20P78556 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCL20P78556 AC092747.4-201ENST00000620519 1861 ntBASIC3.89□□□□□ -1.79
CCL20P78556 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCL20P78556 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCL20P78556 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC3.89□□□□□ -1.79
CCL20P78556 NAMPTP1-201ENST00000440465 2514 ntBASIC3.89□□□□□ -1.79
CCL20P78556 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCL20P78556 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCL20P78556 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCL20P78556 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCL20P78556 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CCL20P78556 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCL20P78556 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC3.88□□□□□ -1.79
CCL20P78556 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.88□□□□□ -1.79
CCL20P78556 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCL20P78556 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC3.88□□□□□ -1.79
CCL20P78556 TTC39DP-201ENST00000416781 1688 ntBASIC3.88□□□□□ -1.79
CCL20P78556 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CCL20P78556 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCL20P78556 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCL20P78556 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCL20P78556 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.88□□□□□ -1.79
CCL20P78556 MAPK10-303ENST00000641324 3959 ntBASIC3.88□□□□□ -1.79
CCL20P78556 SNORA73.1-201ENST00000363107 205 ntBASIC3.88□□□□□ -1.79
CCL20P78556 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CCL20P78556 U3.35-201ENST00000408405 208 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms