Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.24□□□□□ -1.41
YBX1P67809 AC234771.2-201ENST00000445718 597 ntBASIC6.24□□□□□ -1.41
YBX1P67809 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC6.24□□□□□ -1.41
YBX1P67809 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.24□□□□□ -1.41
YBX1P67809 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.24□□□□□ -1.41
YBX1P67809 AC104849.1-201ENST00000462623 405 ntBASIC6.24□□□□□ -1.41
YBX1P67809 AC112198.1-201ENST00000505369 1220 ntBASIC6.24□□□□□ -1.41
YBX1P67809 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.24□□□□□ -1.41
YBX1P67809 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
YBX1P67809 PRDX4P1-201ENST00000507189 574 ntBASIC6.24□□□□□ -1.41
YBX1P67809 GUSBP9-201ENST00000510138 584 ntBASIC6.24□□□□□ -1.41
YBX1P67809 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.24□□□□□ -1.41
YBX1P67809 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.24□□□□□ -1.41
YBX1P67809 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.24□□□□□ -1.41
YBX1P67809 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC6.24□□□□□ -1.41
YBX1P67809 AP001317.1-201ENST00000531194 960 ntBASIC6.24□□□□□ -1.41
YBX1P67809 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.24□□□□□ -1.41
YBX1P67809 AC037479.1-201ENST00000558361 625 ntBASIC6.24□□□□□ -1.41
YBX1P67809 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.24□□□□□ -1.41
YBX1P67809 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.24□□□□□ -1.41
YBX1P67809 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.24□□□□□ -1.41
YBX1P67809 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.24□□□□□ -1.41
YBX1P67809 ROCK1P1-201ENST00000573767 549 ntBASIC6.24□□□□□ -1.41
YBX1P67809 AC011260.1-201ENST00000578420 472 ntBASIC6.24□□□□□ -1.41
YBX1P67809 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.24□□□□□ -1.41
YBX1P67809 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.24□□□□□ -1.41
YBX1P67809 AC013476.2-201ENST00000614456 459 ntBASIC6.24□□□□□ -1.41
YBX1P67809 TCL6_3.1-201ENST00000619064 137 ntBASIC6.24□□□□□ -1.41
YBX1P67809 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.24□□□□□ -1.41
YBX1P67809 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.24□□□□□ -1.41
YBX1P67809 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
YBX1P67809 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
YBX1P67809 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
YBX1P67809 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
YBX1P67809 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
YBX1P67809 AL137100.1-201ENST00000556703 1620 ntBASIC6.24□□□□□ -1.41
YBX1P67809 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
YBX1P67809 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
YBX1P67809 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
YBX1P67809 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.24□□□□□ -1.41
YBX1P67809 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.24□□□□□ -1.41
YBX1P67809 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.23□□□□□ -1.41
YBX1P67809 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.23□□□□□ -1.41
YBX1P67809 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 AC110716.2-201ENST00000563865 3945 ntBASIC6.23□□□□□ -1.41
YBX1P67809 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.23□□□□□ -1.41
YBX1P67809 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
YBX1P67809 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 RNA5SP188-201ENST00000362916 129 ntBASIC6.23□□□□□ -1.41
YBX1P67809 RNA5SP77-201ENST00000365394 120 ntBASIC6.23□□□□□ -1.41
YBX1P67809 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
YBX1P67809 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.23□□□□□ -1.41
YBX1P67809 SNORD65C-201ENST00000390962 71 ntBASIC6.23□□□□□ -1.41
YBX1P67809 DNAJC19P6-201ENST00000401853 280 ntBASIC6.23□□□□□ -1.41
YBX1P67809 AC007568.1-201ENST00000422912 471 ntBASIC6.23□□□□□ -1.41
YBX1P67809 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.23□□□□□ -1.41
YBX1P67809 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.23□□□□□ -1.41
YBX1P67809 AC104651.1-201ENST00000427559 735 ntBASIC6.23□□□□□ -1.41
YBX1P67809 MTND1P2-201ENST00000430604 821 ntBASIC6.23□□□□□ -1.41
YBX1P67809 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.23□□□□□ -1.41
YBX1P67809 RAB9AP5-201ENST00000437794 597 ntBASIC6.23□□□□□ -1.41
YBX1P67809 CNOT7P2-201ENST00000441051 832 ntBASIC6.23□□□□□ -1.41
YBX1P67809 AC245291.3-201ENST00000443400 292 ntBASIC6.23□□□□□ -1.41
YBX1P67809 RAB9AP2-201ENST00000443911 597 ntBASIC6.23□□□□□ -1.41
YBX1P67809 CCRL1P1-201ENST00000449542 1053 ntBASIC6.23□□□□□ -1.41
YBX1P67809 AL445991.1-201ENST00000450381 475 ntBASIC6.23□□□□□ -1.41
YBX1P67809 RN7SL393P-201ENST00000463588 296 ntBASIC6.23□□□□□ -1.41
YBX1P67809 RNA5SP473-201ENST00000516402 125 ntBASIC6.23□□□□□ -1.41
YBX1P67809 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.23□□□□□ -1.41
YBX1P67809 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.23□□□□□ -1.41
YBX1P67809 AP000619.3-201ENST00000535634 1127 ntBASIC6.23□□□□□ -1.41
YBX1P67809 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.23□□□□□ -1.41
YBX1P67809 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC6.23□□□□□ -1.41
YBX1P67809 DPPA3P2-202ENST00000557188 1219 ntBASIC6.23□□□□□ -1.41
YBX1P67809 ANKRD36BP2-206ENST00000575193 1245 ntBASIC6.23□□□□□ -1.41
YBX1P67809 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.23□□□□□ -1.41
YBX1P67809 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC6.23□□□□□ -1.41
YBX1P67809 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.23□□□□□ -1.41
YBX1P67809 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.23□□□□□ -1.41
YBX1P67809 AP003117.2-201ENST00000606010 545 ntBASIC6.23□□□□□ -1.41
YBX1P67809 AL607023.1-201ENST00000620045 248 ntBASIC6.23□□□□□ -1.41
YBX1P67809 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.23□□□□□ -1.41
YBX1P67809 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC6.23□□□□□ -1.41
YBX1P67809 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.23□□□□□ -1.41
YBX1P67809 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
YBX1P67809 TMCC1P1-201ENST00000518897 1980 ntBASIC6.23□□□□□ -1.41
YBX1P67809 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
YBX1P67809 AL355852.1-201ENST00000454081 1771 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms