Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC002553.2-201ENST00000453217 340 ntBASIC6.56□□□□□ -1.36
RHBDL3P58872 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.56□□□□□ -1.36
RHBDL3P58872 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.56□□□□□ -1.36
RHBDL3P58872 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.56□□□□□ -1.36
RHBDL3P58872 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RHBDL3P58872 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.56□□□□□ -1.36
RHBDL3P58872 OR4A17P-201ENST00000526032 904 ntBASIC6.56□□□□□ -1.36
RHBDL3P58872 OR11J2P-201ENST00000555298 907 ntBASIC6.56□□□□□ -1.36
RHBDL3P58872 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.56□□□□□ -1.36
RHBDL3P58872 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.56□□□□□ -1.36
RHBDL3P58872 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.56□□□□□ -1.36
RHBDL3P58872 BNIP3P32-201ENST00000600015 554 ntBASIC6.56□□□□□ -1.36
RHBDL3P58872 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.56□□□□□ -1.36
RHBDL3P58872 AL139407.1-201ENST00000613826 1175 ntBASIC6.56□□□□□ -1.36
RHBDL3P58872 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RHBDL3P58872 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RHBDL3P58872 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RHBDL3P58872 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RHBDL3P58872 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
RHBDL3P58872 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.56□□□□□ -1.36
RHBDL3P58872 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RHBDL3P58872 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
RHBDL3P58872 AC007938.2-201ENST00000604666 2634 ntBASIC6.56□□□□□ -1.36
RHBDL3P58872 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RHBDL3P58872 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RHBDL3P58872 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RHBDL3P58872 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RHBDL3P58872 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RHBDL3P58872 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.56□□□□□ -1.36
RHBDL3P58872 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RHBDL3P58872 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RHBDL3P58872 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
RHBDL3P58872 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RHBDL3P58872 TCP1P3-201ENST00000414406 1498 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RHBDL3P58872 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
RHBDL3P58872 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RHBDL3P58872 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RHBDL3P58872 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RHBDL3P58872 AL121886.1-201ENST00000358609 435 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RHBDL3P58872 U8.4-201ENST00000363626 134 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RHBDL3P58872 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RHBDL3P58872 OR4K12P-201ENST00000406538 961 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 AC108075.1-201ENST00000424692 529 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 MORF4L1P7-201ENST00000426038 703 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 DPY19L1P2-201ENST00000426647 915 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 TMEM183AP1-205ENST00000432739 290 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.55□□□□□ -1.36
RHBDL3P58872 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.55□□□□□ -1.36
RHBDL3P58872 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RHBDL3P58872 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.55□□□□□ -1.36
RHBDL3P58872 CYCSP53-201ENST00000455540 265 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RHBDL3P58872 RPL7AP10-201ENST00000481016 791 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 RN7SL447P-201ENST00000494711 245 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 RN7SL808P-201ENST00000496066 299 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 NDUFA5P12-201ENST00000503796 343 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RHBDL3P58872 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.55□□□□□ -1.36
RHBDL3P58872 RNU6-941P-201ENST00000516346 108 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 VTA1P2-201ENST00000520205 911 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 AC008083.2-201ENST00000546707 476 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.55□□□□□ -1.36
RHBDL3P58872 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.55□□□□□ -1.36
RHBDL3P58872 NPM1P42-201ENST00000560329 862 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 AC093510.2-201ENST00000562820 896 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
RHBDL3P58872 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.55□□□□□ -1.36
RHBDL3P58872 AC084824.5-201ENST00000612009 413 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 AC118658.2-201ENST00000618697 459 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 AC007342.8-201ENST00000623278 678 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.55□□□□□ -1.36
RHBDL3P58872 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RHBDL3P58872 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RHBDL3P58872 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RHBDL3P58872 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.55□□□□□ -1.36
RHBDL3P58872 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
RHBDL3P58872 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.55□□□□□ -1.36
RHBDL3P58872 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RHBDL3P58872 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RHBDL3P58872 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RHBDL3P58872 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RHBDL3P58872 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
RHBDL3P58872 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
RHBDL3P58872 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RHBDL3P58872 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.54□□□□□ -1.36
RHBDL3P58872 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RHBDL3P58872 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
RHBDL3P58872 RPL23AP27-201ENST00000415161 451 ntBASIC6.54□□□□□ -1.36
RHBDL3P58872 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.54□□□□□ -1.36
RHBDL3P58872 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.54□□□□□ -1.36
RHBDL3P58872 CLUHP1-201ENST00000435012 1190 ntBASIC6.54□□□□□ -1.36
RHBDL3P58872 KRT8P51-201ENST00000438938 274 ntBASIC6.54□□□□□ -1.36
RHBDL3P58872 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.54□□□□□ -1.36
RHBDL3P58872 NPM1P39-201ENST00000449818 867 ntBASIC6.54□□□□□ -1.36
RHBDL3P58872 AURKAPS1-201ENST00000451805 1212 ntBASIC6.54□□□□□ -1.36
RHBDL3P58872 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6.54□□□□□ -1.36
RHBDL3P58872 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms