Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 STMN1P1-201ENST00000617809 440 ntBASIC6.02□□□□□ -1.45
NEK3P51956 AC126544.2-201ENST00000625174 749 ntBASIC6.02□□□□□ -1.45
NEK3P51956 AC004808.1-201ENST00000627671 721 ntBASIC6.02□□□□□ -1.45
NEK3P51956 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NEK3P51956 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
NEK3P51956 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
NEK3P51956 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NEK3P51956 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.02□□□□□ -1.45
NEK3P51956 AC130304.1-201ENST00000622942 2385 ntBASIC6.02□□□□□ -1.45
NEK3P51956 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
NEK3P51956 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NEK3P51956 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
NEK3P51956 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.02□□□□□ -1.45
NEK3P51956 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NEK3P51956 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
NEK3P51956 ZNF849P-201ENST00000594711 1566 ntBASIC6.01□□□□□ -1.45
NEK3P51956 AC091305.2-201ENST00000624049 1576 ntBASIC6.01□□□□□ -1.45
NEK3P51956 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
NEK3P51956 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
NEK3P51956 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NEK3P51956 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
NEK3P51956 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.01□□□□□ -1.45
NEK3P51956 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NEK3P51956 AP000473.2-201ENST00000602659 1537 ntBASIC6.01□□□□□ -1.45
NEK3P51956 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NEK3P51956 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NEK3P51956 OR52B3P-201ENST00000314715 928 ntBASIC6.01□□□□□ -1.45
NEK3P51956 SELENOWP1-201ENST00000322792 252 ntBASIC6.01□□□□□ -1.45
NEK3P51956 IGKV7-3-201ENST00000357453 298 ntBASIC6.01□□□□□ -1.45
NEK3P51956 RN7SKP269-201ENST00000365545 319 ntBASIC6.01□□□□□ -1.45
NEK3P51956 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
NEK3P51956 NPM1P40-201ENST00000412758 733 ntBASIC6.01□□□□□ -1.45
NEK3P51956 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.01□□□□□ -1.45
NEK3P51956 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.01□□□□□ -1.45
NEK3P51956 LINC01881-201ENST00000416103 412 ntBASIC6.01□□□□□ -1.45
NEK3P51956 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.01□□□□□ -1.45
NEK3P51956 AC113412.1-201ENST00000425840 504 ntBASIC6.01□□□□□ -1.45
NEK3P51956 BX276092.6-201ENST00000430476 250 ntBASIC6.01□□□□□ -1.45
NEK3P51956 RPL23AP19-201ENST00000436229 369 ntBASIC6.01□□□□□ -1.45
NEK3P51956 ARF4P4-201ENST00000439608 520 ntBASIC6.01□□□□□ -1.45
NEK3P51956 FHP1-201ENST00000442741 703 ntBASIC6.01□□□□□ -1.45
NEK3P51956 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.01□□□□□ -1.45
NEK3P51956 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.01□□□□□ -1.45
NEK3P51956 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.01□□□□□ -1.45
NEK3P51956 BX276092.8-201ENST00000455722 250 ntBASIC6.01□□□□□ -1.45
NEK3P51956 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.01□□□□□ -1.45
NEK3P51956 ACA64.4-201ENST00000459070 127 ntBASIC6.01□□□□□ -1.45
NEK3P51956 RPL21P18-201ENST00000469899 480 ntBASIC6.01□□□□□ -1.45
NEK3P51956 RPL7AP10-201ENST00000481016 791 ntBASIC6.01□□□□□ -1.45
NEK3P51956 RPL7P40-201ENST00000481703 745 ntBASIC6.01□□□□□ -1.45
NEK3P51956 AC008629.2-201ENST00000503783 483 ntBASIC6.01□□□□□ -1.45
NEK3P51956 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.01□□□□□ -1.45
NEK3P51956 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.01□□□□□ -1.45
NEK3P51956 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NEK3P51956 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.01□□□□□ -1.45
NEK3P51956 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.01□□□□□ -1.45
NEK3P51956 RN7SKP288-201ENST00000516227 268 ntBASIC6.01□□□□□ -1.45
NEK3P51956 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.01□□□□□ -1.45
NEK3P51956 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NEK3P51956 AP000648.1-201ENST00000529682 397 ntBASIC6.01□□□□□ -1.45
NEK3P51956 PCNAP4-201ENST00000532690 730 ntBASIC6.01□□□□□ -1.45
NEK3P51956 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.01□□□□□ -1.45
NEK3P51956 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.01□□□□□ -1.45
NEK3P51956 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.01□□□□□ -1.45
NEK3P51956 AC079600.1-201ENST00000550326 297 ntBASIC6.01□□□□□ -1.45
NEK3P51956 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.01□□□□□ -1.45
NEK3P51956 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.01□□□□□ -1.45
NEK3P51956 NPM1P47-201ENST00000560843 856 ntBASIC6.01□□□□□ -1.45
NEK3P51956 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
NEK3P51956 ZNF322P1-201ENST00000568013 1209 ntBASIC6.01□□□□□ -1.45
NEK3P51956 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.01□□□□□ -1.45
NEK3P51956 COX6CP7-201ENST00000597056 208 ntBASIC6.01□□□□□ -1.45
NEK3P51956 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.01□□□□□ -1.45
NEK3P51956 AC027243.2-201ENST00000602530 724 ntBASIC6.01□□□□□ -1.45
NEK3P51956 AL031601.1-201ENST00000605702 394 ntBASIC6.01□□□□□ -1.45
NEK3P51956 AC026124.2-201ENST00000621847 656 ntBASIC6.01□□□□□ -1.45
NEK3P51956 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.01□□□□□ -1.45
NEK3P51956 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.01□□□□□ -1.45
NEK3P51956 AL355480.1-201ENST00000629041 99 ntBASIC6.01□□□□□ -1.45
NEK3P51956 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NEK3P51956 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NEK3P51956 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NEK3P51956 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
NEK3P51956 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
NEK3P51956 BX005019.1-201ENST00000561881 1810 ntBASIC6.01□□□□□ -1.45
NEK3P51956 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NEK3P51956 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.01□□□□□ -1.45
NEK3P51956 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NEK3P51956 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NEK3P51956 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.01□□□□□ -1.45
NEK3P51956 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
NEK3P51956 AC004076.2-201ENST00000620532 3323 ntBASIC6□□□□□ -1.45
NEK3P51956 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6□□□□□ -1.45
NEK3P51956 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6□□□□□ -1.45
NEK3P51956 HSPD1P14-201ENST00000432666 1618 ntBASIC6□□□□□ -1.45
NEK3P51956 THAP12P9-201ENST00000503971 2360 ntBASIC6□□□□□ -1.45
NEK3P51956 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6□□□□□ -1.45
NEK3P51956 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NEK3P51956 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
NEK3P51956 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms