Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.44□□□□□ -1.54
TNFSF9P41273 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.44□□□□□ -1.54
TNFSF9P41273 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.44□□□□□ -1.54
TNFSF9P41273 VN1R54P-201ENST00000435210 1049 ntBASIC5.44□□□□□ -1.54
TNFSF9P41273 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.44□□□□□ -1.54
TNFSF9P41273 AL450023.3-201ENST00000440592 271 ntBASIC5.44□□□□□ -1.54
TNFSF9P41273 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.44□□□□□ -1.54
TNFSF9P41273 RN7SL319P-201ENST00000480656 221 ntBASIC5.44□□□□□ -1.54
TNFSF9P41273 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.44□□□□□ -1.54
TNFSF9P41273 AP000676.2-201ENST00000529711 301 ntBASIC5.44□□□□□ -1.54
TNFSF9P41273 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.44□□□□□ -1.54
TNFSF9P41273 GCSHP4-201ENST00000538792 439 ntBASIC5.44□□□□□ -1.54
TNFSF9P41273 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.44□□□□□ -1.54
TNFSF9P41273 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.44□□□□□ -1.54
TNFSF9P41273 AC087783.2-201ENST00000605070 562 ntBASIC5.44□□□□□ -1.54
TNFSF9P41273 AC005377.1-201ENST00000605126 456 ntBASIC5.44□□□□□ -1.54
TNFSF9P41273 AL139041.1-201ENST00000605480 610 ntBASIC5.44□□□□□ -1.54
TNFSF9P41273 AC239803.2-201ENST00000610161 430 ntBASIC5.44□□□□□ -1.54
TNFSF9P41273 MIR6748-201ENST00000610433 71 ntBASIC5.44□□□□□ -1.54
TNFSF9P41273 AC112694.2-201ENST00000623697 768 ntBASIC5.44□□□□□ -1.54
TNFSF9P41273 AC112255.1-201ENST00000624070 2493 ntBASIC5.44□□□□□ -1.54
TNFSF9P41273 AL353662.3-201ENST00000625131 237 ntBASIC5.44□□□□□ -1.54
TNFSF9P41273 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TNFSF9P41273 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.44□□□□□ -1.54
TNFSF9P41273 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
TNFSF9P41273 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
TNFSF9P41273 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
TNFSF9P41273 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
TNFSF9P41273 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TNFSF9P41273 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.43□□□□□ -1.54
TNFSF9P41273 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.43□□□□□ -1.54
TNFSF9P41273 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.43□□□□□ -1.54
TNFSF9P41273 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.43□□□□□ -1.54
TNFSF9P41273 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
TNFSF9P41273 RPL7P58-201ENST00000402913 758 ntBASIC5.43□□□□□ -1.54
TNFSF9P41273 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.43□□□□□ -1.54
TNFSF9P41273 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.43□□□□□ -1.54
TNFSF9P41273 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TNFSF9P41273 AL136455.1-201ENST00000441083 1240 ntBASIC5.43□□□□□ -1.54
TNFSF9P41273 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.43□□□□□ -1.54
TNFSF9P41273 AL691482.1-201ENST00000453255 87 ntBASIC5.43□□□□□ -1.54
TNFSF9P41273 RN7SL441P-201ENST00000492388 296 ntBASIC5.43□□□□□ -1.54
TNFSF9P41273 RN7SL591P-201ENST00000496150 292 ntBASIC5.43□□□□□ -1.54
TNFSF9P41273 AC008033.2-201ENST00000542626 177 ntBASIC5.43□□□□□ -1.54
TNFSF9P41273 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.43□□□□□ -1.54
TNFSF9P41273 AL512310.9-201ENST00000553311 948 ntBASIC5.43□□□□□ -1.54
TNFSF9P41273 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.43□□□□□ -1.54
TNFSF9P41273 NDUFB4P11-201ENST00000560510 395 ntBASIC5.43□□□□□ -1.54
TNFSF9P41273 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.43□□□□□ -1.54
TNFSF9P41273 AC027216.1-201ENST00000577726 685 ntBASIC5.43□□□□□ -1.54
TNFSF9P41273 FRG1EP-201ENST00000634469 770 ntBASIC5.43□□□□□ -1.54
TNFSF9P41273 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TNFSF9P41273 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.43□□□□□ -1.54
TNFSF9P41273 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
TNFSF9P41273 TRIM51GP-201ENST00000534741 1350 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TNFSF9P41273 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TNFSF9P41273 SCARNA15-201ENST00000607520 4325 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TNFSF9P41273 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TNFSF9P41273 RN7SKP103-201ENST00000363848 320 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 SNORA5.1-201ENST00000384275 131 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 LRRC37BP1-201ENST00000398851 714 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 AP002530.1-201ENST00000405705 684 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 RN7SKP216-201ENST00000411050 312 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 AC013410.1-201ENST00000436223 1232 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 AL590399.4-201ENST00000436561 601 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 RPL7P11-201ENST00000437586 658 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.42□□□□□ -1.54
TNFSF9P41273 HIGD1AP8-201ENST00000453927 274 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.42□□□□□ -1.54
TNFSF9P41273 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TNFSF9P41273 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.42□□□□□ -1.54
TNFSF9P41273 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.42□□□□□ -1.54
TNFSF9P41273 AC093815.1-201ENST00000508637 280 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 RNA5SP392-201ENST00000516905 112 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 AP001922.4-201ENST00000526967 290 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.42□□□□□ -1.54
TNFSF9P41273 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.42□□□□□ -1.54
TNFSF9P41273 AC021006.3-201ENST00000530771 192 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.42□□□□□ -1.54
TNFSF9P41273 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.42□□□□□ -1.54
TNFSF9P41273 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.42□□□□□ -1.54
TNFSF9P41273 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.42□□□□□ -1.54
TNFSF9P41273 AC073575.2-201ENST00000614212 627 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 AL356752.1-201ENST00000615844 593 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 AP001784.1-201ENST00000624107 428 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.42□□□□□ -1.54
TNFSF9P41273 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TNFSF9P41273 AL121839.2-201ENST00000565058 6943 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TNFSF9P41273 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
TNFSF9P41273 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.42□□□□□ -1.54
TNFSF9P41273 ADAM5-202ENST00000399789 1942 ntBASIC5.42□□□□□ -1.54
TNFSF9P41273 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.42□□□□□ -1.54
TNFSF9P41273 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TNFSF9P41273 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
TNFSF9P41273 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.42□□□□□ -1.54
TNFSF9P41273 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms