Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SCN4AP35499 IGHV5-78-201ENST00000450948 295 ntBASIC6.04□□□□□ -1.44
SCN4AP35499 AC011276.1-201ENST00000469688 323 ntBASIC6.04□□□□□ -1.44
SCN4AP35499 AC136777.2-201ENST00000522979 358 ntBASIC6.04□□□□□ -1.44
SCN4AP35499 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SCN4AP35499 AP000619.2-201ENST00000546014 969 ntBASIC6.04□□□□□ -1.44
SCN4AP35499 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.04□□□□□ -1.44
SCN4AP35499 CCT8P1-201ENST00000413611 1657 ntBASIC6.04□□□□□ -1.44
SCN4AP35499 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SCN4AP35499 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SCN4AP35499 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.03□□□□□ -1.44
SCN4AP35499 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SCN4AP35499 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SCN4AP35499 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SCN4AP35499 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SCN4AP35499 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SCN4AP35499 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SCN4AP35499 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SCN4AP35499 AC079097.1-201ENST00000512187 1399 ntBASIC6.03□□□□□ -1.44
SCN4AP35499 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SCN4AP35499 RNA5SP447-201ENST00000363749 119 ntBASIC6.03□□□□□ -1.44
SCN4AP35499 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SCN4AP35499 RPS27AP12-201ENST00000429552 465 ntBASIC6.03□□□□□ -1.44
SCN4AP35499 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SCN4AP35499 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.03□□□□□ -1.44
SCN4AP35499 AC044797.1-201ENST00000445744 679 ntBASIC6.03□□□□□ -1.44
SCN4AP35499 RN7SL443P-201ENST00000464331 290 ntBASIC6.03□□□□□ -1.44
SCN4AP35499 RN7SL814P-201ENST00000487715 300 ntBASIC6.03□□□□□ -1.44
SCN4AP35499 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.03□□□□□ -1.44
SCN4AP35499 RNA5SP464-201ENST00000516251 108 ntBASIC6.03□□□□□ -1.44
SCN4AP35499 OR8Q1P-201ENST00000526467 655 ntBASIC6.03□□□□□ -1.44
SCN4AP35499 CYCSP29-201ENST00000533731 318 ntBASIC6.03□□□□□ -1.44
SCN4AP35499 AC105129.1-201ENST00000560250 297 ntBASIC6.03□□□□□ -1.44
SCN4AP35499 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SCN4AP35499 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC6.03□□□□□ -1.44
SCN4AP35499 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.03□□□□□ -1.44
SCN4AP35499 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SCN4AP35499 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SCN4AP35499 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.03□□□□□ -1.44
SCN4AP35499 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SCN4AP35499 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SCN4AP35499 SNORA48.7-201ENST00000391302 135 ntBASIC6.02□□□□□ -1.45
SCN4AP35499 PPIAP9-201ENST00000403866 498 ntBASIC6.02□□□□□ -1.45
SCN4AP35499 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SCN4AP35499 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.02□□□□□ -1.45
SCN4AP35499 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.02□□□□□ -1.45
SCN4AP35499 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.02□□□□□ -1.45
SCN4AP35499 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.02□□□□□ -1.45
SCN4AP35499 TCEA1P1-201ENST00000449716 880 ntBASIC6.02□□□□□ -1.45
SCN4AP35499 RPL7P32-201ENST00000457119 744 ntBASIC6.02□□□□□ -1.45
SCN4AP35499 RPL23AP56-201ENST00000460778 453 ntBASIC6.02□□□□□ -1.45
SCN4AP35499 AC034236.1-201ENST00000469891 373 ntBASIC6.02□□□□□ -1.45
SCN4AP35499 RPL7AP10-201ENST00000481016 791 ntBASIC6.02□□□□□ -1.45
SCN4AP35499 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.02□□□□□ -1.45
SCN4AP35499 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.02□□□□□ -1.45
SCN4AP35499 KPNA2P3-201ENST00000584190 848 ntBASIC6.02□□□□□ -1.45
SCN4AP35499 AC093227.2-201ENST00000589357 285 ntBASIC6.02□□□□□ -1.45
SCN4AP35499 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SCN4AP35499 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SCN4AP35499 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SCN4AP35499 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.02□□□□□ -1.45
SCN4AP35499 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SCN4AP35499 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.02□□□□□ -1.45
SCN4AP35499 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SCN4AP35499 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SCN4AP35499 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.02□□□□□ -1.45
SCN4AP35499 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SCN4AP35499 UGT2B24P-201ENST00000514441 1597 ntBASIC6.02□□□□□ -1.45
SCN4AP35499 AP000432.2-201ENST00000624164 2048 ntBASIC6.02□□□□□ -1.45
SCN4AP35499 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
SCN4AP35499 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.02□□□□□ -1.45
SCN4AP35499 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SCN4AP35499 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
SCN4AP35499 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SCN4AP35499 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SCN4AP35499 U3.30-201ENST00000391308 210 ntBASIC6.02□□□□□ -1.45
SCN4AP35499 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SCN4AP35499 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.02□□□□□ -1.45
SCN4AP35499 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.02□□□□□ -1.45
SCN4AP35499 AC069366.1-201ENST00000583159 838 ntBASIC6.02□□□□□ -1.45
SCN4AP35499 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.02□□□□□ -1.45
SCN4AP35499 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
SCN4AP35499 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SCN4AP35499 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SCN4AP35499 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.01□□□□□ -1.45
SCN4AP35499 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.01□□□□□ -1.45
SCN4AP35499 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SCN4AP35499 ZNF969P-201ENST00000510345 2341 ntBASIC6.01□□□□□ -1.45
SCN4AP35499 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SCN4AP35499 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SCN4AP35499 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SCN4AP35499 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SCN4AP35499 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.01□□□□□ -1.45
SCN4AP35499 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SCN4AP35499 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SCN4AP35499 IGKV7-3-201ENST00000357453 298 ntBASIC6.01□□□□□ -1.45
SCN4AP35499 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SCN4AP35499 RPL12P28-201ENST00000430852 489 ntBASIC6.01□□□□□ -1.45
SCN4AP35499 CBX1P1-201ENST00000440184 427 ntBASIC6.01□□□□□ -1.45
SCN4AP35499 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms