Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 TXNP5-201ENST00000441043 315 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC7.95□□□□□ -1.14
CLIP1P30622 RPL36AP15-201ENST00000444514 266 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 RBMY2TP-201ENST00000451162 947 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 OR2A3P-201ENST00000493774 953 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC7.95□□□□□ -1.14
CLIP1P30622 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.95□□□□□ -1.14
CLIP1P30622 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC7.95□□□□□ -1.14
CLIP1P30622 AC091042.1-201ENST00000579213 173 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 AC068790.4-201ENST00000602474 263 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 AC020910.3-201ENST00000603701 874 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 AC018695.5-201ENST00000605872 315 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 MIR6780A-201ENST00000615089 68 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 RNA5SP439-201ENST00000617595 124 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 AL731566.2-201ENST00000618971 317 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CLIP1P30622 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CLIP1P30622 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CLIP1P30622 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.95□□□□□ -1.14
CLIP1P30622 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC7.95□□□□□ -1.14
CLIP1P30622 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CLIP1P30622 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CLIP1P30622 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.95□□□□□ -1.14
CLIP1P30622 AC007618.1-201ENST00000366455 732 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 RNA5SP113-201ENST00000410486 84 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 AL354766.1-201ENST00000423396 542 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC7.95□□□□□ -1.14
CLIP1P30622 COX6CP13-201ENST00000428703 226 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 RPL5P25-201ENST00000441148 775 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC7.95□□□□□ -1.14
CLIP1P30622 RN7SL319P-201ENST00000480656 221 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 RN7SL244P-201ENST00000493405 297 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 KRTAP5-14P-201ENST00000502328 121 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CLIP1P30622 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC7.95□□□□□ -1.14
CLIP1P30622 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.95□□□□□ -1.14
CLIP1P30622 AC087821.1-201ENST00000623639 567 ntBASIC7.95□□□□□ -1.14
CLIP1P30622 AC004158.1-201ENST00000564508 4319 ntBASIC7.94□□□□□ -1.14
CLIP1P30622 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CLIP1P30622 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CLIP1P30622 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CLIP1P30622 AC140134.1-201ENST00000511830 3544 ntBASIC7.94□□□□□ -1.14
CLIP1P30622 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
CLIP1P30622 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CLIP1P30622 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CLIP1P30622 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CLIP1P30622 ECM1P2-201ENST00000503354 1577 ntBASIC7.94□□□□□ -1.14
CLIP1P30622 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CLIP1P30622 AP001029.2-203ENST00000589795 4910 ntBASIC7.94□□□□□ -1.14
CLIP1P30622 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
CLIP1P30622 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
CLIP1P30622 ADIG-201ENST00000373348 430 ntTSL 2 BASIC7.94□□□□□ -1.14
CLIP1P30622 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CLIP1P30622 Z97832.1-201ENST00000402490 328 ntBASIC7.94□□□□□ -1.14
CLIP1P30622 AL021331.1-201ENST00000402817 582 ntBASIC7.94□□□□□ -1.14
CLIP1P30622 RPL10P10-201ENST00000403509 664 ntBASIC7.94□□□□□ -1.14
CLIP1P30622 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CLIP1P30622 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC7.94□□□□□ -1.14
CLIP1P30622 AC097486.1-201ENST00000515331 210 ntBASIC7.94□□□□□ -1.14
CLIP1P30622 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CLIP1P30622 AC116553.2-201ENST00000564203 463 ntBASIC7.94□□□□□ -1.14
CLIP1P30622 AC209154.1-201ENST00000582156 337 ntBASIC7.94□□□□□ -1.14
CLIP1P30622 AL391358.1-201ENST00000605342 190 ntBASIC7.94□□□□□ -1.14
CLIP1P30622 AC012557.1-201ENST00000607115 611 ntBASIC7.94□□□□□ -1.14
CLIP1P30622 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC7.94□□□□□ -1.14
CLIP1P30622 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CLIP1P30622 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
CLIP1P30622 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CLIP1P30622 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.93□□□□□ -1.14
CLIP1P30622 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CLIP1P30622 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
CLIP1P30622 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
CLIP1P30622 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CLIP1P30622 WAC-209ENST00000428935 1320 ntTSL 2 BASIC7.93□□□□□ -1.14
CLIP1P30622 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CLIP1P30622 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CLIP1P30622 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
CLIP1P30622 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
CLIP1P30622 AC119751.6-201ENST00000416712 186 ntBASIC7.93□□□□□ -1.14
CLIP1P30622 EIF2S2P3-201ENST00000428356 999 ntBASIC7.93□□□□□ -1.14
CLIP1P30622 AC116562.1-201ENST00000485355 781 ntBASIC7.93□□□□□ -1.14
CLIP1P30622 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7.93□□□□□ -1.14
CLIP1P30622 OR5AN2P-201ENST00000534535 896 ntBASIC7.93□□□□□ -1.14
CLIP1P30622 AC008147.3-201ENST00000548666 354 ntBASIC7.93□□□□□ -1.14
CLIP1P30622 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.93□□□□□ -1.14
CLIP1P30622 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC7.93□□□□□ -1.14
CLIP1P30622 MIR5096-201ENST00000583713 70 ntBASIC7.93□□□□□ -1.14
CLIP1P30622 AC119674.1-217ENST00000641942 1086 ntBASIC7.93□□□□□ -1.14
CLIP1P30622 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CLIP1P30622 USP8-204ENST00000425032 3559 ntTSL 2 BASIC7.93□□□□□ -1.14
CLIP1P30622 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CLIP1P30622 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CLIP1P30622 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
CLIP1P30622 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC7.92□□□□□ -1.14
CLIP1P30622 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CLIP1P30622 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CLIP1P30622 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CLIP1P30622 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CLIP1P30622 ZNF652P1-201ENST00000442420 1309 ntBASIC7.92□□□□□ -1.14
CLIP1P30622 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms