Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MIR6826-201ENST00000617808 98 ntBASIC4.8□□□□□ -1.64
SHC1P29353 AL356094.1-201ENST00000624663 1212 ntBASIC4.8□□□□□ -1.64
SHC1P29353 AP003400.3-201ENST00000624904 346 ntBASIC4.8□□□□□ -1.64
SHC1P29353 AL138960.2-201ENST00000625145 535 ntBASIC4.8□□□□□ -1.64
SHC1P29353 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.8□□□□□ -1.64
SHC1P29353 SAMMSON-227ENST00000642114 1199 ntBASIC4.8□□□□□ -1.64
SHC1P29353 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.8□□□□□ -1.64
SHC1P29353 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.8□□□□□ -1.64
SHC1P29353 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.8□□□□□ -1.64
SHC1P29353 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
SHC1P29353 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHC1P29353 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHC1P29353 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHC1P29353 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHC1P29353 AL731532.2-201ENST00000623542 1953 ntBASIC4.79□□□□□ -1.64
SHC1P29353 RNU1-146P-201ENST00000364015 165 ntBASIC4.79□□□□□ -1.64
SHC1P29353 MIR105-1-201ENST00000385222 81 ntBASIC4.79□□□□□ -1.64
SHC1P29353 CTSL3P-202ENST00000412179 788 ntBASIC4.79□□□□□ -1.64
SHC1P29353 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHC1P29353 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.79□□□□□ -1.64
SHC1P29353 AC013410.2-201ENST00000422627 201 ntBASIC4.79□□□□□ -1.64
SHC1P29353 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SHC1P29353 AC245047.2-201ENST00000441060 530 ntBASIC4.79□□□□□ -1.64
SHC1P29353 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.79□□□□□ -1.64
SHC1P29353 AC015864.1-201ENST00000496512 544 ntBASIC4.79□□□□□ -1.64
SHC1P29353 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHC1P29353 MTND3P3-201ENST00000505004 126 ntBASIC4.79□□□□□ -1.64
SHC1P29353 COL6A4P2-205ENST00000509855 506 ntBASIC4.79□□□□□ -1.64
SHC1P29353 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.79□□□□□ -1.64
SHC1P29353 AC025857.1-201ENST00000525252 377 ntBASIC4.79□□□□□ -1.64
SHC1P29353 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.79□□□□□ -1.64
SHC1P29353 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.79□□□□□ -1.64
SHC1P29353 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.79□□□□□ -1.64
SHC1P29353 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.79□□□□□ -1.64
SHC1P29353 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.79□□□□□ -1.64
SHC1P29353 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.79□□□□□ -1.64
SHC1P29353 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.79□□□□□ -1.64
SHC1P29353 MIR1269B-201ENST00000580405 75 ntBASIC4.79□□□□□ -1.64
SHC1P29353 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.79□□□□□ -1.64
SHC1P29353 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.79□□□□□ -1.64
SHC1P29353 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.79□□□□□ -1.64
SHC1P29353 AC005229.3-201ENST00000603438 323 ntBASIC4.79□□□□□ -1.64
SHC1P29353 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.79□□□□□ -1.64
SHC1P29353 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHC1P29353 MIR6837-201ENST00000620884 64 ntBASIC4.79□□□□□ -1.64
SHC1P29353 HPVC1-201ENST00000629899 1198 ntBASIC4.79□□□□□ -1.64
SHC1P29353 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SHC1P29353 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.79□□□□□ -1.64
SHC1P29353 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHC1P29353 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHC1P29353 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHC1P29353 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SHC1P29353 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHC1P29353 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.79□□□□□ -1.64
SHC1P29353 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.79□□□□□ -1.64
SHC1P29353 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
SHC1P29353 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHC1P29353 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHC1P29353 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.78□□□□□ -1.64
SHC1P29353 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SHC1P29353 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHC1P29353 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHC1P29353 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.78□□□□□ -1.64
SHC1P29353 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.78□□□□□ -1.64
SHC1P29353 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SHC1P29353 AL136116.2-201ENST00000404020 785 ntBASIC4.78□□□□□ -1.64
SHC1P29353 BX510359.3-201ENST00000422168 306 ntBASIC4.78□□□□□ -1.64
SHC1P29353 MTND2P9-201ENST00000422293 931 ntBASIC4.78□□□□□ -1.64
SHC1P29353 AL355433.1-201ENST00000422804 300 ntBASIC4.78□□□□□ -1.64
SHC1P29353 SETP10-201ENST00000424368 814 ntBASIC4.78□□□□□ -1.64
SHC1P29353 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.78□□□□□ -1.64
SHC1P29353 AC108075.1-201ENST00000424692 529 ntBASIC4.78□□□□□ -1.64
SHC1P29353 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.78□□□□□ -1.64
SHC1P29353 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.78□□□□□ -1.64
SHC1P29353 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.78□□□□□ -1.64
SHC1P29353 RPL7P6-201ENST00000480903 738 ntBASIC4.78□□□□□ -1.64
SHC1P29353 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.78□□□□□ -1.64
SHC1P29353 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.78□□□□□ -1.64
SHC1P29353 RPS12P31-201ENST00000491419 398 ntBASIC4.78□□□□□ -1.64
SHC1P29353 AL133372.1-201ENST00000493565 745 ntBASIC4.78□□□□□ -1.64
SHC1P29353 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.78□□□□□ -1.64
SHC1P29353 NIFKP7-201ENST00000503365 834 ntBASIC4.78□□□□□ -1.64
SHC1P29353 RNU6-467P-201ENST00000517027 110 ntBASIC4.78□□□□□ -1.64
SHC1P29353 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.78□□□□□ -1.64
SHC1P29353 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHC1P29353 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.78□□□□□ -1.64
SHC1P29353 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.78□□□□□ -1.64
SHC1P29353 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHC1P29353 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.78□□□□□ -1.64
SHC1P29353 OR11J2P-201ENST00000555298 907 ntBASIC4.78□□□□□ -1.64
SHC1P29353 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.78□□□□□ -1.64
SHC1P29353 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHC1P29353 AP000919.1-201ENST00000582850 985 ntBASIC4.78□□□□□ -1.64
SHC1P29353 AC069307.1-201ENST00000602820 447 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms