Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RN7SKP16-201ENST00000410180 299 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 PPP2R2DP1-201ENST00000420526 637 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 CLUHP1-201ENST00000435012 1190 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 MYO5BP2-201ENST00000449815 1277 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 TPT1P1-201ENST00000458495 518 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 RNA5SP103-201ENST00000459503 118 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC026348.1-201ENST00000462549 1053 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC091544.1-201ENST00000484702 348 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 RN7SL346P-201ENST00000491561 294 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 RPS24P16-201ENST00000497294 392 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DMBP28068 YWHABP2-201ENST00000540201 713 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC004825.1-201ENST00000555068 586 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC040958.1-201ENST00000561102 201 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 RN7SL708P-201ENST00000580952 299 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC060766.1-201ENST00000590824 627 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 FKBP1AP1-201ENST00000594588 318 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 GMFG-202ENST00000594700 397 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC005252.1-201ENST00000604518 1063 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 AL162431.4-201ENST00000604674 411 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.97□□□□□ -1.77
HLA-DMBP28068 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DMBP28068 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DMBP28068 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DMBP28068 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HLA-DMBP28068 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC3.96□□□□□ -1.77
HLA-DMBP28068 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.96□□□□□ -1.77
HLA-DMBP28068 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
HLA-DMBP28068 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DMBP28068 CYP4Z2P-201ENST00000423332 1512 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DMBP28068 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DMBP28068 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 MAX-203ENST00000341653 330 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 RNU1-77P-201ENST00000390868 162 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 MIR1178-201ENST00000408396 91 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 RNA5SP487-201ENST00000410186 122 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DMBP28068 BX510359.3-201ENST00000422168 306 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 ANAPC1P1-201ENST00000426186 2145 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 AL163193.1-201ENST00000444895 788 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 GAPDHP25-201ENST00000447061 1001 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 AC021660.1-201ENST00000465006 554 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 RN7SL189P-201ENST00000468631 289 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 AC027308.1-201ENST00000517993 110 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 AC022360.1-201ENST00000521058 340 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 RPL10P14-201ENST00000565265 298 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 MIR1269B-201ENST00000580405 75 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 AC013244.1-201ENST00000604279 193 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 SSX9-202ENST00000608568 580 ntTSL 4 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 AC008115.4-201ENST00000619780 775 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 AC004808.2-201ENST00000627965 773 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 CASC19-264ENST00000641912 1184 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 CASC19-221ENST00000641309 1382 ntBASIC3.96□□□□□ -1.78
HLA-DMBP28068 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DMBP28068 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
HLA-DMBP28068 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms