Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.62□□□□□ -1.03
PTPREP23469 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC8.62□□□□□ -1.03
PTPREP23469 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
PTPREP23469 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PTPREP23469 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PTPREP23469 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
PTPREP23469 RNU6-533P-201ENST00000384144 107 ntBASIC8.62□□□□□ -1.03
PTPREP23469 CREM-214ENST00000395887 849 ntTSL 5 BASIC8.62□□□□□ -1.03
PTPREP23469 ATP5HP3-201ENST00000396994 486 ntBASIC8.62□□□□□ -1.03
PTPREP23469 RPL32P23-201ENST00000397237 405 ntBASIC8.62□□□□□ -1.03
PTPREP23469 AL355862.1-201ENST00000412705 353 ntBASIC8.62□□□□□ -1.03
PTPREP23469 NPM1P40-201ENST00000412758 733 ntBASIC8.62□□□□□ -1.03
PTPREP23469 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC8.62□□□□□ -1.03
PTPREP23469 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC8.62□□□□□ -1.03
PTPREP23469 Z68868.1-201ENST00000429048 544 ntBASIC8.62□□□□□ -1.03
PTPREP23469 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC8.62□□□□□ -1.03
PTPREP23469 LYPLA1P1-201ENST00000434514 622 ntBASIC8.62□□□□□ -1.03
PTPREP23469 ANXA2P2-201ENST00000435128 1020 ntBASIC8.62□□□□□ -1.03
PTPREP23469 IFNA20P-201ENST00000436840 528 ntBASIC8.62□□□□□ -1.03
PTPREP23469 RPS10P14-201ENST00000440748 502 ntBASIC8.62□□□□□ -1.03
PTPREP23469 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
PTPREP23469 RANP1-206ENST00000455094 651 ntBASIC8.62□□□□□ -1.03
PTPREP23469 AC063943.1-201ENST00000465434 453 ntBASIC8.62□□□□□ -1.03
PTPREP23469 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PTPREP23469 RN7SL569P-201ENST00000494652 288 ntBASIC8.62□□□□□ -1.03
PTPREP23469 OR7E99P-201ENST00000505750 922 ntBASIC8.62□□□□□ -1.03
PTPREP23469 AC233724.10-201ENST00000510454 409 ntBASIC8.62□□□□□ -1.03
PTPREP23469 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC8.62□□□□□ -1.03
PTPREP23469 BTF3P12-201ENST00000519620 469 ntBASIC8.62□□□□□ -1.03
PTPREP23469 IGHVIII-67-4-201ENST00000524281 296 ntBASIC8.62□□□□□ -1.03
PTPREP23469 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC8.62□□□□□ -1.03
PTPREP23469 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC8.62□□□□□ -1.03
PTPREP23469 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC8.62□□□□□ -1.03
PTPREP23469 AC126323.4-201ENST00000566935 234 ntBASIC8.62□□□□□ -1.03
PTPREP23469 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC8.62□□□□□ -1.03
PTPREP23469 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC8.62□□□□□ -1.03
PTPREP23469 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC8.62□□□□□ -1.03
PTPREP23469 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC8.62□□□□□ -1.03
PTPREP23469 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC8.62□□□□□ -1.03
PTPREP23469 AC115286.1-201ENST00000604298 434 ntBASIC8.62□□□□□ -1.03
PTPREP23469 DISC2.1-201ENST00000612827 205 ntBASIC8.62□□□□□ -1.03
PTPREP23469 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PTPREP23469 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC8.62□□□□□ -1.03
PTPREP23469 AC022106.2-201ENST00000620114 757 ntBASIC8.62□□□□□ -1.03
PTPREP23469 RN7SL680P-201ENST00000620379 299 ntBASIC8.62□□□□□ -1.03
PTPREP23469 AC090617.10-201ENST00000624308 134 ntBASIC8.62□□□□□ -1.03
PTPREP23469 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC8.62□□□□□ -1.03
PTPREP23469 WNK1-220ENST00000574564 1401 ntBASIC8.62□□□□□ -1.03
PTPREP23469 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
PTPREP23469 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC8.61□□□□□ -1.03
PTPREP23469 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 ELL2P4-201ENST00000446870 1376 ntBASIC8.61□□□□□ -1.03
PTPREP23469 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.61□□□□□ -1.03
PTPREP23469 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC8.61□□□□□ -1.03
PTPREP23469 AC107982.1-201ENST00000507171 1300 ntBASIC8.61□□□□□ -1.03
PTPREP23469 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 DDX10P2-201ENST00000417796 2614 ntBASIC8.61□□□□□ -1.03
PTPREP23469 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC8.61□□□□□ -1.03
PTPREP23469 SAMMSON-203ENST00000641005 2168 ntBASIC8.61□□□□□ -1.03
PTPREP23469 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.61□□□□□ -1.03
PTPREP23469 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
PTPREP23469 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 ENSAP3-201ENST00000312710 333 ntBASIC8.61□□□□□ -1.03
PTPREP23469 Y_RNA.395-201ENST00000383945 109 ntBASIC8.61□□□□□ -1.03
PTPREP23469 MIR525-201ENST00000384978 85 ntBASIC8.61□□□□□ -1.03
PTPREP23469 RN7SKP59-201ENST00000410520 314 ntBASIC8.61□□□□□ -1.03
PTPREP23469 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC8.61□□□□□ -1.03
PTPREP23469 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 AKR1B10P1-201ENST00000425765 942 ntBASIC8.61□□□□□ -1.03
PTPREP23469 AC013403.1-201ENST00000436954 263 ntBASIC8.61□□□□□ -1.03
PTPREP23469 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 RPS26P30-201ENST00000443431 335 ntBASIC8.61□□□□□ -1.03
PTPREP23469 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
PTPREP23469 MTND1P12-201ENST00000455231 147 ntBASIC8.61□□□□□ -1.03
PTPREP23469 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC8.61□□□□□ -1.03
PTPREP23469 AC005550.2-201ENST00000476382 318 ntBASIC8.61□□□□□ -1.03
PTPREP23469 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC8.61□□□□□ -1.03
PTPREP23469 RPL10P7-201ENST00000495649 625 ntBASIC8.61□□□□□ -1.03
PTPREP23469 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC8.61□□□□□ -1.03
PTPREP23469 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC8.61□□□□□ -1.03
PTPREP23469 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC8.61□□□□□ -1.03
PTPREP23469 AC107222.1-201ENST00000510899 637 ntBASIC8.61□□□□□ -1.03
PTPREP23469 RPL7L1P4-201ENST00000513004 707 ntBASIC8.61□□□□□ -1.03
PTPREP23469 AC114797.1-201ENST00000514003 728 ntBASIC8.61□□□□□ -1.03
PTPREP23469 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC8.61□□□□□ -1.03
PTPREP23469 RGS5-218ENST00000526176 574 ntTSL 4 BASIC8.61□□□□□ -1.03
PTPREP23469 AP000790.1-201ENST00000528891 737 ntBASIC8.61□□□□□ -1.03
PTPREP23469 AC063950.1-201ENST00000552036 308 ntBASIC8.61□□□□□ -1.03
PTPREP23469 FRG2DP-202ENST00000566967 323 ntBASIC8.61□□□□□ -1.03
PTPREP23469 AC010547.7-201ENST00000570323 333 ntBASIC8.61□□□□□ -1.03
PTPREP23469 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC8.61□□□□□ -1.03
PTPREP23469 RN7SL835P-201ENST00000579920 262 ntBASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms