Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
XRCC1P18887 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
XRCC1P18887 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
XRCC1P18887 AC100778.3-201ENST00000580060 1750 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 AC112198.2-201ENST00000426589 6996 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
XRCC1P18887 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
XRCC1P18887 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.2□□□□□ -1.58
XRCC1P18887 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.2□□□□□ -1.58
XRCC1P18887 RNU1-43P-201ENST00000365052 165 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
XRCC1P18887 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.2□□□□□ -1.58
XRCC1P18887 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.2□□□□□ -1.58
XRCC1P18887 RN7SKP273-201ENST00000411392 314 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 DPPA2P3-201ENST00000411853 655 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.2□□□□□ -1.58
XRCC1P18887 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
XRCC1P18887 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.2□□□□□ -1.58
XRCC1P18887 AL389915.2-201ENST00000454576 441 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
XRCC1P18887 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.2□□□□□ -1.58
XRCC1P18887 RN7SL423P-201ENST00000486202 304 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 RPS12P31-201ENST00000491419 398 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 RPL15P21-201ENST00000495592 567 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 NIFKP7-201ENST00000503365 834 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 SNRPCP2-201ENST00000504370 475 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
XRCC1P18887 KCTD9P6-201ENST00000522306 950 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.2□□□□□ -1.58
XRCC1P18887 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
XRCC1P18887 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.2□□□□□ -1.58
XRCC1P18887 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.2□□□□□ -1.58
XRCC1P18887 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.2□□□□□ -1.58
XRCC1P18887 AC010547.7-201ENST00000570323 333 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.2□□□□□ -1.58
XRCC1P18887 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.2□□□□□ -1.58
XRCC1P18887 AC005252.1-201ENST00000604518 1063 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 AL121612.2-201ENST00000612261 482 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 AL139407.1-201ENST00000613826 1175 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.2□□□□□ -1.58
XRCC1P18887 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.2□□□□□ -1.58
XRCC1P18887 CYP4F35P-202ENST00000636121 390 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
XRCC1P18887 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.2□□□□□ -1.58
XRCC1P18887 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
XRCC1P18887 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.2□□□□□ -1.58
XRCC1P18887 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
XRCC1P18887 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
XRCC1P18887 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
XRCC1P18887 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
XRCC1P18887 AL929601.4-201ENST00000613011 1341 ntBASIC5.2□□□□□ -1.58
XRCC1P18887 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
XRCC1P18887 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.19□□□□□ -1.58
XRCC1P18887 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.19□□□□□ -1.58
XRCC1P18887 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
XRCC1P18887 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
XRCC1P18887 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
XRCC1P18887 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.19□□□□□ -1.58
XRCC1P18887 NAMPTP1-201ENST00000440465 2514 ntBASIC5.19□□□□□ -1.58
XRCC1P18887 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
XRCC1P18887 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
XRCC1P18887 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.19□□□□□ -1.58
XRCC1P18887 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.19□□□□□ -1.58
XRCC1P18887 AURKAPS1-201ENST00000451805 1212 ntBASIC5.19□□□□□ -1.58
XRCC1P18887 AC104849.1-201ENST00000462623 405 ntBASIC5.19□□□□□ -1.58
XRCC1P18887 RN7SL515P-201ENST00000463999 297 ntBASIC5.19□□□□□ -1.58
XRCC1P18887 AC004815.1-201ENST00000484185 331 ntBASIC5.19□□□□□ -1.58
XRCC1P18887 AC058823.1-201ENST00000485315 474 ntBASIC5.19□□□□□ -1.58
XRCC1P18887 AC008953.1-201ENST00000497334 318 ntBASIC5.19□□□□□ -1.58
XRCC1P18887 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.19□□□□□ -1.58
XRCC1P18887 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
XRCC1P18887 AP006245.2-201ENST00000522004 300 ntBASIC5.19□□□□□ -1.58
XRCC1P18887 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.19□□□□□ -1.58
XRCC1P18887 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.19□□□□□ -1.58
XRCC1P18887 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.19□□□□□ -1.58
XRCC1P18887 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.19□□□□□ -1.58
XRCC1P18887 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.19□□□□□ -1.58
XRCC1P18887 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.19□□□□□ -1.58
XRCC1P18887 MIR4472-2-201ENST00000582069 67 ntBASIC5.19□□□□□ -1.58
XRCC1P18887 AC010615.3-201ENST00000597319 394 ntBASIC5.19□□□□□ -1.58
XRCC1P18887 BX323046.1-201ENST00000610145 535 ntBASIC5.19□□□□□ -1.58
XRCC1P18887 AC037198.3-201ENST00000616754 526 ntBASIC5.19□□□□□ -1.58
XRCC1P18887 AP002505.2-201ENST00000623585 696 ntBASIC5.19□□□□□ -1.58
XRCC1P18887 AP003400.3-201ENST00000624904 346 ntBASIC5.19□□□□□ -1.58
XRCC1P18887 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
XRCC1P18887 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
XRCC1P18887 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.19□□□□□ -1.58
XRCC1P18887 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
XRCC1P18887 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
XRCC1P18887 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
XRCC1P18887 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
XRCC1P18887 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
XRCC1P18887 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
XRCC1P18887 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
XRCC1P18887 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
XRCC1P18887 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.18□□□□□ -1.58
XRCC1P18887 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
XRCC1P18887 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.18□□□□□ -1.58
XRCC1P18887 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.18□□□□□ -1.58
XRCC1P18887 DUTP5-201ENST00000406790 469 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms