Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HOXC6P09630 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC6P09630 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC6P09630 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC6P09630 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC6P09630 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HOXC6P09630 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.94□□□□□ -1.46
HOXC6P09630 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
HOXC6P09630 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC6P09630 AC004158.1-201ENST00000564508 4319 ntBASIC5.93□□□□□ -1.46
HOXC6P09630 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC6P09630 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC6P09630 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HOXC6P09630 RNA5SP455-201ENST00000365190 119 ntBASIC5.93□□□□□ -1.46
HOXC6P09630 RN7SKP17-201ENST00000411242 351 ntBASIC5.93□□□□□ -1.46
HOXC6P09630 NPM1P40-201ENST00000412758 733 ntBASIC5.93□□□□□ -1.46
HOXC6P09630 AL133482.1-201ENST00000415988 498 ntBASIC5.93□□□□□ -1.46
HOXC6P09630 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC6P09630 AL390879.2-203ENST00000426943 1121 ntBASIC5.93□□□□□ -1.46
HOXC6P09630 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC6P09630 AL161722.2-201ENST00000434731 981 ntBASIC5.93□□□□□ -1.46
HOXC6P09630 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC6P09630 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC6P09630 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC6P09630 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC6P09630 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC6P09630 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC6P09630 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC6P09630 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC6P09630 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC6P09630 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC6P09630 SNORD116-30-201ENST00000516468 85 ntBASIC5.93□□□□□ -1.46
HOXC6P09630 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC6P09630 OR5D2P-201ENST00000524390 911 ntBASIC5.93□□□□□ -1.46
HOXC6P09630 OR4A17P-201ENST00000526032 904 ntBASIC5.93□□□□□ -1.46
HOXC6P09630 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC6P09630 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC6P09630 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC6P09630 AL161616.1-201ENST00000611867 286 ntBASIC5.93□□□□□ -1.46
HOXC6P09630 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
HOXC6P09630 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC6P09630 AC007159.1-201ENST00000566529 4706 ntBASIC5.93□□□□□ -1.46
HOXC6P09630 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC6P09630 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC6P09630 IRF5P1-201ENST00000504852 2164 ntBASIC5.93□□□□□ -1.46
HOXC6P09630 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC6P09630 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
HOXC6P09630 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC6P09630 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC6P09630 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXC6P09630 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HOXC6P09630 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
HOXC6P09630 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC6P09630 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC6P09630 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC6P09630 Y_RNA.110-201ENST00000363220 99 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 RNA5SP90-201ENST00000364801 99 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
HOXC6P09630 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HOXC6P09630 OR8V1P-201ENST00000395193 873 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 DHFRP5-201ENST00000406944 564 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.92□□□□□ -1.46
HOXC6P09630 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXC6P09630 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC6P09630 MRPS21P3-201ENST00000436696 262 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXC6P09630 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC6P09630 RPL34P20-201ENST00000442771 351 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 VN1R48P-201ENST00000448149 1036 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 AC096741.1-201ENST00000472250 846 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC6P09630 AC022133.1-201ENST00000490961 571 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 AGGF1P3-201ENST00000493675 1213 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 AC140172.1-201ENST00000502928 141 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXC6P09630 AC113398.2-201ENST00000507630 558 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXC6P09630 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.92□□□□□ -1.46
HOXC6P09630 BTF3P13-201ENST00000513224 490 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 SCARNA20.4-201ENST00000516969 131 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXC6P09630 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXC6P09630 AC008147.3-201ENST00000548666 354 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC6P09630 MIR4697-201ENST00000582977 78 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 AC025857.2-201ENST00000602711 238 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 AC008814.1-201ENST00000603797 406 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 AL031320.1-201ENST00000604177 357 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 AC012557.1-201ENST00000607115 611 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 AC018690.1-201ENST00000608144 626 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 MIR6780A-201ENST00000615089 68 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HOXC6P09630 AL731566.2-201ENST00000618971 317 ntBASIC5.92□□□□□ -1.46
HOXC6P09630 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC6P09630 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC6P09630 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC6P09630 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC6P09630 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC6P09630 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC6P09630 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms