Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
TPM1P09493 MIR133B-201ENST00000362210 119 ntBASIC5.63□□□□□ -1.51
TPM1P09493 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TPM1P09493 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TPM1P09493 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.63□□□□□ -1.51
TPM1P09493 RN7SKP247-201ENST00000411094 308 ntBASIC5.63□□□□□ -1.51
TPM1P09493 AL596448.1-201ENST00000415024 392 ntBASIC5.63□□□□□ -1.51
TPM1P09493 BMS1P17-202ENST00000416720 316 ntBASIC5.63□□□□□ -1.51
TPM1P09493 AL358176.3-201ENST00000420757 454 ntBASIC5.63□□□□□ -1.51
TPM1P09493 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.63□□□□□ -1.51
TPM1P09493 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.63□□□□□ -1.51
TPM1P09493 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.63□□□□□ -1.51
TPM1P09493 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.63□□□□□ -1.51
TPM1P09493 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.63□□□□□ -1.51
TPM1P09493 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.63□□□□□ -1.51
TPM1P09493 AC239798.3-201ENST00000454459 408 ntBASIC5.63□□□□□ -1.51
TPM1P09493 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.63□□□□□ -1.51
TPM1P09493 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
TPM1P09493 AC138866.2-201ENST00000508650 584 ntBASIC5.63□□□□□ -1.51
TPM1P09493 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TPM1P09493 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.63□□□□□ -1.51
TPM1P09493 Vault.2-201ENST00000516519 98 ntBASIC5.63□□□□□ -1.51
TPM1P09493 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.63□□□□□ -1.51
TPM1P09493 BLZF2P-201ENST00000553776 1130 ntBASIC5.63□□□□□ -1.51
TPM1P09493 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.63□□□□□ -1.51
TPM1P09493 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.63□□□□□ -1.51
TPM1P09493 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TPM1P09493 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.63□□□□□ -1.51
TPM1P09493 CU639417.4-201ENST00000623928 207 ntBASIC5.63□□□□□ -1.51
TPM1P09493 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TPM1P09493 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.63□□□□□ -1.51
TPM1P09493 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.63□□□□□ -1.51
TPM1P09493 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.63□□□□□ -1.51
TPM1P09493 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TPM1P09493 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TPM1P09493 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TPM1P09493 Z95327.2-201ENST00000414579 1873 ntBASIC5.62□□□□□ -1.51
TPM1P09493 AC092747.4-201ENST00000620519 1861 ntBASIC5.62□□□□□ -1.51
TPM1P09493 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.62□□□□□ -1.51
TPM1P09493 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TPM1P09493 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TPM1P09493 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TPM1P09493 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
TPM1P09493 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TPM1P09493 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TPM1P09493 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TPM1P09493 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TPM1P09493 U3.32-201ENST00000408116 212 ntBASIC5.62□□□□□ -1.51
TPM1P09493 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.62□□□□□ -1.51
TPM1P09493 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.62□□□□□ -1.51
TPM1P09493 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.62□□□□□ -1.51
TPM1P09493 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.62□□□□□ -1.51
TPM1P09493 DSTNP5-201ENST00000427921 523 ntBASIC5.62□□□□□ -1.51
TPM1P09493 AL591623.2-201ENST00000449978 222 ntBASIC5.62□□□□□ -1.51
TPM1P09493 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.62□□□□□ -1.51
TPM1P09493 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.62□□□□□ -1.51
TPM1P09493 AC005412.2-201ENST00000492004 341 ntBASIC5.62□□□□□ -1.51
TPM1P09493 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TPM1P09493 TCP11X3P-202ENST00000514289 1254 ntBASIC5.62□□□□□ -1.51
TPM1P09493 RNA5SP249-201ENST00000516127 99 ntBASIC5.62□□□□□ -1.51
TPM1P09493 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.62□□□□□ -1.51
TPM1P09493 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.62□□□□□ -1.51
TPM1P09493 AC000068.2-201ENST00000608816 460 ntBASIC5.62□□□□□ -1.51
TPM1P09493 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.62□□□□□ -1.51
TPM1P09493 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.62□□□□□ -1.51
TPM1P09493 AC135068.12-201ENST00000637370 931 ntBASIC5.62□□□□□ -1.51
TPM1P09493 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.62□□□□□ -1.51
TPM1P09493 CR382285.2-201ENST00000624662 1495 ntBASIC5.62□□□□□ -1.51
TPM1P09493 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TPM1P09493 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TPM1P09493 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
TPM1P09493 AC097461.1-201ENST00000568928 2821 ntBASIC5.61□□□□□ -1.51
TPM1P09493 OR13C1P-202ENST00000641378 2919 ntBASIC5.61□□□□□ -1.51
TPM1P09493 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TPM1P09493 AP001273.1-201ENST00000624493 3152 ntBASIC5.61□□□□□ -1.51
TPM1P09493 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM1P09493 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM1P09493 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
TPM1P09493 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.61□□□□□ -1.51
TPM1P09493 RNA5SP90-201ENST00000364801 99 ntBASIC5.61□□□□□ -1.51
TPM1P09493 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.61□□□□□ -1.51
TPM1P09493 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM1P09493 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TPM1P09493 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.61□□□□□ -1.51
TPM1P09493 AC022795.1-201ENST00000473808 480 ntBASIC5.61□□□□□ -1.51
TPM1P09493 OR2A3P-201ENST00000493774 953 ntBASIC5.61□□□□□ -1.51
TPM1P09493 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.61□□□□□ -1.51
TPM1P09493 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM1P09493 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TPM1P09493 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM1P09493 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.61□□□□□ -1.51
TPM1P09493 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.61□□□□□ -1.51
TPM1P09493 AP002884.5-201ENST00000595053 1132 ntBASIC5.61□□□□□ -1.51
TPM1P09493 AC120338.1-201ENST00000625074 1541 ntBASIC5.61□□□□□ -1.51
TPM1P09493 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TPM1P09493 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TPM1P09493 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
TPM1P09493 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TPM1P09493 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TPM1P09493 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms