Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.9□□□□□ -1.79
CXCL1P09341 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CXCL1P09341 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CXCL1P09341 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CXCL1P09341 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.9□□□□□ -1.79
CXCL1P09341 PANDAR-201ENST00000629595 1506 ntBASIC3.9□□□□□ -1.79
CXCL1P09341 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC3.89□□□□□ -1.79
CXCL1P09341 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CXCL1P09341 AC087190.4-201ENST00000574616 8334 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CXCL1P09341 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CXCL1P09341 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CXCL1P09341 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC3.89□□□□□ -1.79
CXCL1P09341 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.89□□□□□ -1.79
CXCL1P09341 MIR448-201ENST00000362131 111 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 RNU1-108P-201ENST00000362556 161 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 RNA5SP132-201ENST00000364725 118 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 RNU1-74P-201ENST00000384108 171 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 MIR191-201ENST00000384873 92 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 CEACAMP8-201ENST00000413902 580 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC3.89□□□□□ -1.79
CXCL1P09341 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC3.89□□□□□ -1.79
CXCL1P09341 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC3.89□□□□□ -1.79
CXCL1P09341 AC093414.1-201ENST00000434712 514 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CXCL1P09341 KF459542.1-201ENST00000450908 553 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CXCL1P09341 LRRC37A14P-201ENST00000452297 462 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 AP000547.1-201ENST00000454360 617 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC3.89□□□□□ -1.79
CXCL1P09341 LDHBP2-201ENST00000456969 1005 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 AC058823.1-201ENST00000485315 474 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC3.89□□□□□ -1.79
CXCL1P09341 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC3.89□□□□□ -1.79
CXCL1P09341 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC3.89□□□□□ -1.79
CXCL1P09341 AL845552.1-201ENST00000556820 323 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.89□□□□□ -1.79
CXCL1P09341 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC3.89□□□□□ -1.79
CXCL1P09341 AC116553.2-201ENST00000564203 463 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 MRPS21P7-201ENST00000566937 238 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.89□□□□□ -1.79
CXCL1P09341 AP001496.3-201ENST00000580230 913 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC3.89□□□□□ -1.79
CXCL1P09341 AC015802.2-201ENST00000589690 189 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 AC091167.5-201ENST00000605689 894 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.89□□□□□ -1.79
CXCL1P09341 AL669942.2-201ENST00000620352 697 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC3.89□□□□□ -1.79
CXCL1P09341 AC007204.1-201ENST00000621794 555 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 MIR8080-201ENST00000622224 89 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.89□□□□□ -1.79
CXCL1P09341 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CXCL1P09341 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CXCL1P09341 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CXCL1P09341 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.89□□□□□ -1.79
CXCL1P09341 AC027228.2-201ENST00000567141 2154 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CXCL1P09341 ECM1P2-201ENST00000503354 1577 ntBASIC3.89□□□□□ -1.79
CXCL1P09341 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.89□□□□□ -1.79
CXCL1P09341 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CXCL1P09341 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.88□□□□□ -1.79
CXCL1P09341 MAPK10-286ENST00000641208 8747 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL1P09341 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL1P09341 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.88□□□□□ -1.79
CXCL1P09341 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL1P09341 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CXCL1P09341 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL1P09341 MRE11P1-201ENST00000464884 2127 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL1P09341 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
CXCL1P09341 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CXCL1P09341 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CXCL1P09341 RNU1-146P-201ENST00000364015 165 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 RNU4-2-201ENST00000365668 141 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 MIR137-201ENST00000385223 102 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL1P09341 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CXCL1P09341 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.88□□□□□ -1.79
CXCL1P09341 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC3.88□□□□□ -1.79
CXCL1P09341 MRPL48P1-201ENST00000445390 636 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 TDGF1P1-201ENST00000445734 527 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC3.88□□□□□ -1.79
CXCL1P09341 AL359839.1-201ENST00000451975 1160 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 AC002553.2-201ENST00000453217 340 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC3.88□□□□□ -1.79
CXCL1P09341 ACA64.1-201ENST00000459171 127 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.88□□□□□ -1.79
CXCL1P09341 PPM1AP1-201ENST00000502740 1135 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.88□□□□□ -1.79
CXCL1P09341 HMGB3P13-201ENST00000511263 607 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC3.88□□□□□ -1.79
CXCL1P09341 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC3.88□□□□□ -1.79
CXCL1P09341 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.88□□□□□ -1.79
CXCL1P09341 AC079905.1-201ENST00000549280 475 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 AC079075.1-201ENST00000559543 878 ntBASIC3.88□□□□□ -1.79
CXCL1P09341 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC3.88□□□□□ -1.79
CXCL1P09341 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC3.88□□□□□ -1.79
CXCL1P09341 RBM22P12-201ENST00000567098 1255 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms