Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TPM3P06753 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TPM3P06753 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TPM3P06753 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.72□□□□□ -1.49
TPM3P06753 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.71□□□□□ -1.49
TPM3P06753 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
TPM3P06753 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
TPM3P06753 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
TPM3P06753 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TPM3P06753 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TPM3P06753 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TPM3P06753 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.71□□□□□ -1.5
TPM3P06753 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TPM3P06753 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.71□□□□□ -1.5
TPM3P06753 AL672167.2-201ENST00000377164 879 ntBASIC5.71□□□□□ -1.5
TPM3P06753 AL133388.1-201ENST00000404509 287 ntBASIC5.71□□□□□ -1.5
TPM3P06753 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.71□□□□□ -1.5
TPM3P06753 AC066692.1-201ENST00000421721 457 ntBASIC5.71□□□□□ -1.5
TPM3P06753 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.71□□□□□ -1.5
TPM3P06753 RPS26P2-201ENST00000440331 348 ntBASIC5.71□□□□□ -1.5
TPM3P06753 ARL4AP3-201ENST00000441452 574 ntBASIC5.71□□□□□ -1.5
TPM3P06753 EEF1B2P6-201ENST00000445713 673 ntBASIC5.71□□□□□ -1.5
TPM3P06753 AC073476.1-201ENST00000452854 407 ntBASIC5.71□□□□□ -1.5
TPM3P06753 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TPM3P06753 AC108161.1-201ENST00000461060 402 ntBASIC5.71□□□□□ -1.5
TPM3P06753 RN7SL51P-201ENST00000468230 285 ntBASIC5.71□□□□□ -1.5
TPM3P06753 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.71□□□□□ -1.5
TPM3P06753 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.71□□□□□ -1.5
TPM3P06753 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.71□□□□□ -1.5
TPM3P06753 AC008126.1-201ENST00000549019 480 ntBASIC5.71□□□□□ -1.5
TPM3P06753 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.71□□□□□ -1.5
TPM3P06753 NDUFB4P11-201ENST00000560510 395 ntBASIC5.71□□□□□ -1.5
TPM3P06753 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.71□□□□□ -1.5
TPM3P06753 AC116553.2-201ENST00000564203 463 ntBASIC5.71□□□□□ -1.5
TPM3P06753 CYCSP40-201ENST00000575927 294 ntBASIC5.71□□□□□ -1.5
TPM3P06753 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.71□□□□□ -1.5
TPM3P06753 BNIP3P35-201ENST00000604530 490 ntBASIC5.71□□□□□ -1.5
TPM3P06753 AL008729.2-201ENST00000606393 473 ntBASIC5.71□□□□□ -1.5
TPM3P06753 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.71□□□□□ -1.5
TPM3P06753 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TPM3P06753 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TPM3P06753 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TPM3P06753 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TPM3P06753 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TPM3P06753 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TPM3P06753 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TPM3P06753 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TPM3P06753 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TPM3P06753 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TPM3P06753 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.7□□□□□ -1.5
TPM3P06753 SALL4P2-201ENST00000423288 2910 ntBASIC5.7□□□□□ -1.5
TPM3P06753 RN7SKP224-201ENST00000364140 325 ntBASIC5.7□□□□□ -1.5
TPM3P06753 MIR137-201ENST00000385223 102 ntBASIC5.7□□□□□ -1.5
TPM3P06753 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TPM3P06753 EEF1B2P8-201ENST00000414101 671 ntBASIC5.7□□□□□ -1.5
TPM3P06753 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.7□□□□□ -1.5
TPM3P06753 RANP7-201ENST00000418085 644 ntBASIC5.7□□□□□ -1.5
TPM3P06753 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.7□□□□□ -1.5
TPM3P06753 AC110602.1-201ENST00000437414 318 ntBASIC5.7□□□□□ -1.5
TPM3P06753 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.7□□□□□ -1.5
TPM3P06753 AC104634.1-201ENST00000452720 462 ntBASIC5.7□□□□□ -1.5
TPM3P06753 HLA-DPA3-207ENST00000454398 229 ntBASIC5.7□□□□□ -1.5
TPM3P06753 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.7□□□□□ -1.5
TPM3P06753 AC097173.1-201ENST00000505862 819 ntBASIC5.7□□□□□ -1.5
TPM3P06753 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM3P06753 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM3P06753 TRIM77BP-201ENST00000524985 1119 ntBASIC5.7□□□□□ -1.5
TPM3P06753 HMGB1P40-201ENST00000525121 540 ntBASIC5.7□□□□□ -1.5
TPM3P06753 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
TPM3P06753 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.7□□□□□ -1.5
TPM3P06753 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.7□□□□□ -1.5
TPM3P06753 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TPM3P06753 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TPM3P06753 AC104118.1-201ENST00000607625 1589 ntBASIC5.7□□□□□ -1.5
TPM3P06753 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TPM3P06753 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
TPM3P06753 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.7□□□□□ -1.5
TPM3P06753 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
TPM3P06753 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TPM3P06753 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TPM3P06753 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TPM3P06753 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.7□□□□□ -1.5
TPM3P06753 MTCO1P22-201ENST00000604619 1360 ntBASIC5.69□□□□□ -1.5
TPM3P06753 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TPM3P06753 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
TPM3P06753 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.69□□□□□ -1.5
TPM3P06753 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.69□□□□□ -1.5
TPM3P06753 CASC19-206ENST00000641028 1430 ntBASIC5.69□□□□□ -1.5
TPM3P06753 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TPM3P06753 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TPM3P06753 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TPM3P06753 RNA5SP433-201ENST00000364491 114 ntBASIC5.69□□□□□ -1.5
TPM3P06753 RNA5SP122-201ENST00000384457 108 ntBASIC5.69□□□□□ -1.5
TPM3P06753 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TPM3P06753 SNORA68.2-201ENST00000391263 128 ntBASIC5.69□□□□□ -1.5
TPM3P06753 AL512422.1-201ENST00000407033 553 ntBASIC5.69□□□□□ -1.5
TPM3P06753 AC093155.2-201ENST00000420734 937 ntBASIC5.69□□□□□ -1.5
TPM3P06753 AL358176.3-201ENST00000420757 454 ntBASIC5.69□□□□□ -1.5
TPM3P06753 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.69□□□□□ -1.5
TPM3P06753 TNPO1P1-201ENST00000423641 1138 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms