Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VTNP04004 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.61□□□□□ -1.51
VTNP04004 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.61□□□□□ -1.51
VTNP04004 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
VTNP04004 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VTNP04004 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.61□□□□□ -1.51
VTNP04004 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.61□□□□□ -1.51
VTNP04004 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
VTNP04004 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
VTNP04004 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.6□□□□□ -1.51
VTNP04004 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VTNP04004 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VTNP04004 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.6□□□□□ -1.51
VTNP04004 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTNP04004 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.6□□□□□ -1.51
VTNP04004 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VTNP04004 RN7SKP115-201ENST00000363177 317 ntBASIC5.6□□□□□ -1.51
VTNP04004 RNU6-316P-201ENST00000391027 107 ntBASIC5.6□□□□□ -1.51
VTNP04004 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VTNP04004 RN7SKP216-201ENST00000411050 312 ntBASIC5.6□□□□□ -1.51
VTNP04004 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.6□□□□□ -1.51
VTNP04004 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VTNP04004 UBE2V2P1-201ENST00000434717 398 ntBASIC5.6□□□□□ -1.51
VTNP04004 PRPF38AP2-201ENST00000438179 851 ntBASIC5.6□□□□□ -1.51
VTNP04004 AC073648.4-201ENST00000442655 781 ntBASIC5.6□□□□□ -1.51
VTNP04004 MED28P3-201ENST00000444288 531 ntBASIC5.6□□□□□ -1.51
VTNP04004 AL137845.2-201ENST00000444292 988 ntBASIC5.6□□□□□ -1.51
VTNP04004 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.6□□□□□ -1.51
VTNP04004 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.6□□□□□ -1.51
VTNP04004 AC009963.4-201ENST00000448535 339 ntBASIC5.6□□□□□ -1.51
VTNP04004 IGHV5-78-201ENST00000450948 295 ntBASIC5.6□□□□□ -1.51
VTNP04004 OR7L1P-201ENST00000456181 380 ntBASIC5.6□□□□□ -1.51
VTNP04004 RNU7-157P-201ENST00000459600 66 ntBASIC5.6□□□□□ -1.51
VTNP04004 AC092324.1-201ENST00000468671 324 ntBASIC5.6□□□□□ -1.51
VTNP04004 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.6□□□□□ -1.51
VTNP04004 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.6□□□□□ -1.51
VTNP04004 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.6□□□□□ -1.51
VTNP04004 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.6□□□□□ -1.51
VTNP04004 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTNP04004 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.6□□□□□ -1.51
VTNP04004 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.6□□□□□ -1.51
VTNP04004 AL031320.1-201ENST00000604177 357 ntBASIC5.6□□□□□ -1.51
VTNP04004 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.6□□□□□ -1.51
VTNP04004 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTNP04004 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VTNP04004 AC063952.1-203ENST00000634410 658 ntBASIC5.6□□□□□ -1.51
VTNP04004 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
VTNP04004 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.6□□□□□ -1.51
VTNP04004 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.6□□□□□ -1.51
VTNP04004 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.6□□□□□ -1.51
VTNP04004 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VTNP04004 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
VTNP04004 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.6□□□□□ -1.51
VTNP04004 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.6□□□□□ -1.51
VTNP04004 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.6□□□□□ -1.51
VTNP04004 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTNP04004 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VTNP04004 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
VTNP04004 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.59□□□□□ -1.51
VTNP04004 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VTNP04004 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VTNP04004 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VTNP04004 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VTNP04004 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.59□□□□□ -1.51
VTNP04004 AC233968.1-201ENST00000611212 1300 ntBASIC5.59□□□□□ -1.51
VTNP04004 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
VTNP04004 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VTNP04004 RN7SKP149-201ENST00000363008 344 ntBASIC5.59□□□□□ -1.51
VTNP04004 RN7SKP113-201ENST00000363891 295 ntBASIC5.59□□□□□ -1.51
VTNP04004 RNU11-201ENST00000387069 134 ntBASIC5.59□□□□□ -1.51
VTNP04004 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.59□□□□□ -1.51
VTNP04004 AC008072.1-201ENST00000434254 824 ntBASIC5.59□□□□□ -1.51
VTNP04004 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.59□□□□□ -1.51
VTNP04004 AC112498.1-201ENST00000444401 332 ntBASIC5.59□□□□□ -1.51
VTNP04004 TCEA1P1-201ENST00000449716 880 ntBASIC5.59□□□□□ -1.51
VTNP04004 RN7SL319P-201ENST00000480656 221 ntBASIC5.59□□□□□ -1.51
VTNP04004 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.59□□□□□ -1.51
VTNP04004 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.59□□□□□ -1.51
VTNP04004 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.59□□□□□ -1.51
VTNP04004 MRPS33P2-201ENST00000507850 322 ntBASIC5.59□□□□□ -1.51
VTNP04004 RNU6-1334P-201ENST00000516032 105 ntBASIC5.59□□□□□ -1.51
VTNP04004 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.59□□□□□ -1.51
VTNP04004 GCSHP4-201ENST00000538792 439 ntBASIC5.59□□□□□ -1.51
VTNP04004 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.59□□□□□ -1.51
VTNP04004 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.59□□□□□ -1.51
VTNP04004 NMNAT1P1-201ENST00000554095 876 ntBASIC5.59□□□□□ -1.51
VTNP04004 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.59□□□□□ -1.51
VTNP04004 AC009117.1-201ENST00000563948 554 ntBASIC5.59□□□□□ -1.51
VTNP04004 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.59□□□□□ -1.51
VTNP04004 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.59□□□□□ -1.51
VTNP04004 AL360012.1-201ENST00000602813 131 ntBASIC5.59□□□□□ -1.51
VTNP04004 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.59□□□□□ -1.51
VTNP04004 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
VTNP04004 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
VTNP04004 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
VTNP04004 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.59□□□□□ -1.52
VTNP04004 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
VTNP04004 AL450345.1-202ENST00000605741 3881 ntBASIC5.59□□□□□ -1.52
VTNP04004 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
VTNP04004 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms