Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.08□□□□□ -1.6
CLPTM1O96005 AL606490.8-201ENST00000441624 319 ntBASIC5.08□□□□□ -1.6
CLPTM1O96005 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLPTM1O96005 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLPTM1O96005 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.08□□□□□ -1.6
CLPTM1O96005 AC112206.4-201ENST00000515142 405 ntBASIC5.08□□□□□ -1.6
CLPTM1O96005 RN7SKP46-201ENST00000515942 234 ntBASIC5.08□□□□□ -1.6
CLPTM1O96005 RNU6-943P-201ENST00000516960 98 ntBASIC5.08□□□□□ -1.6
CLPTM1O96005 TRIM51DP-201ENST00000529746 596 ntBASIC5.08□□□□□ -1.6
CLPTM1O96005 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.08□□□□□ -1.6
CLPTM1O96005 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.08□□□□□ -1.6
CLPTM1O96005 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.08□□□□□ -1.6
CLPTM1O96005 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.08□□□□□ -1.6
CLPTM1O96005 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.08□□□□□ -1.6
CLPTM1O96005 AC006530.1-201ENST00000555980 571 ntBASIC5.08□□□□□ -1.6
CLPTM1O96005 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.08□□□□□ -1.6
CLPTM1O96005 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.08□□□□□ -1.6
CLPTM1O96005 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.08□□□□□ -1.6
CLPTM1O96005 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.08□□□□□ -1.6
CLPTM1O96005 AL136131.3-201ENST00000607600 188 ntBASIC5.08□□□□□ -1.6
CLPTM1O96005 AL139099.4-201ENST00000614802 114 ntBASIC5.08□□□□□ -1.6
CLPTM1O96005 AC009032.1-201ENST00000617574 431 ntBASIC5.08□□□□□ -1.6
CLPTM1O96005 AC015914.2-201ENST00000618167 288 ntBASIC5.08□□□□□ -1.6
CLPTM1O96005 AC253576.2-201ENST00000618815 580 ntBASIC5.08□□□□□ -1.6
CLPTM1O96005 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLPTM1O96005 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLPTM1O96005 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLPTM1O96005 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLPTM1O96005 RLIMP2-201ENST00000427891 1563 ntBASIC5.08□□□□□ -1.6
CLPTM1O96005 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLPTM1O96005 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLPTM1O96005 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLPTM1O96005 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLPTM1O96005 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.07□□□□□ -1.6
CLPTM1O96005 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CLPTM1O96005 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLPTM1O96005 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CLPTM1O96005 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.07□□□□□ -1.6
CLPTM1O96005 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLPTM1O96005 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLPTM1O96005 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLPTM1O96005 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.07□□□□□ -1.6
CLPTM1O96005 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLPTM1O96005 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLPTM1O96005 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLPTM1O96005 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLPTM1O96005 RNU6-618P-201ENST00000363518 112 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 RNU6-670P-201ENST00000364312 104 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 RN7SKP28-201ENST00000364770 305 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLPTM1O96005 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLPTM1O96005 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLPTM1O96005 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.07□□□□□ -1.6
CLPTM1O96005 AC013442.1-201ENST00000397347 228 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 MIR1203-201ENST00000408812 85 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.07□□□□□ -1.6
CLPTM1O96005 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.07□□□□□ -1.6
CLPTM1O96005 AL357078.2-201ENST00000416486 427 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.07□□□□□ -1.6
CLPTM1O96005 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.07□□□□□ -1.6
CLPTM1O96005 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.07□□□□□ -1.6
CLPTM1O96005 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.07□□□□□ -1.6
CLPTM1O96005 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.07□□□□□ -1.6
CLPTM1O96005 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.07□□□□□ -1.6
CLPTM1O96005 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.07□□□□□ -1.6
CLPTM1O96005 RBMY2TP-201ENST00000451162 947 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 AC144530.1-201ENST00000452862 555 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.07□□□□□ -1.6
CLPTM1O96005 AC107015.1-201ENST00000466902 747 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 AL122020.1-201ENST00000472287 459 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 RN7SL57P-201ENST00000493687 290 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLPTM1O96005 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.07□□□□□ -1.6
CLPTM1O96005 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLPTM1O96005 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.07□□□□□ -1.6
CLPTM1O96005 RNA5SP271-201ENST00000516700 88 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.07□□□□□ -1.6
CLPTM1O96005 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CLPTM1O96005 IGKV2-4-201ENST00000523070 340 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.07□□□□□ -1.6
CLPTM1O96005 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.07□□□□□ -1.6
CLPTM1O96005 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.07□□□□□ -1.6
CLPTM1O96005 AC122134.1-201ENST00000565664 1104 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 FAM60CP-201ENST00000591086 664 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 AC073111.2-201ENST00000605657 1075 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 AC016542.1-201ENST00000608259 493 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.07□□□□□ -1.6
CLPTM1O96005 BX005214.3-202ENST00000619809 325 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CLPTM1O96005 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLPTM1O96005 OR11H2-202ENST00000641517 1085 ntBASIC5.07□□□□□ -1.6
CLPTM1O96005 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLPTM1O96005 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CLPTM1O96005 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLPTM1O96005 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.07□□□□□ -1.6
CLPTM1O96005 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.06□□□□□ -1.6
CLPTM1O96005 AL513548.1-201ENST00000562904 1724 ntBASIC5.06□□□□□ -1.6
CLPTM1O96005 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CLPTM1O96005 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CLPTM1O96005 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms