Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 NIFKP7-201ENST00000503365 834 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM1O00151 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM1O00151 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM1O00151 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.1□□□□□ -1.59
PDLIM1O00151 AC021146.3-201ENST00000511911 260 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 CCNHP1-201ENST00000513311 678 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM1O00151 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM1O00151 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM1O00151 OR11H3P-201ENST00000554547 982 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM1O00151 GLRXP2-201ENST00000555594 321 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM1O00151 DPPA2P4-201ENST00000563717 878 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM1O00151 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM1O00151 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM1O00151 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM1O00151 AC107905.1-201ENST00000616204 426 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 AP000648.2-201ENST00000624182 404 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 AC135068.5-201ENST00000624197 983 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 AC073869.8-201ENST00000641806 335 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 AL022322.2-201ENST00000624072 20397 ntBASIC5.1□□□□□ -1.59
PDLIM1O00151 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM1O00151 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM1O00151 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM1O00151 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM1O00151 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM1O00151 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.09□□□□□ -1.59
PDLIM1O00151 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.09□□□□□ -1.59
PDLIM1O00151 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM1O00151 MT-RNR2-201ENST00000387347 1559 ntBASIC5.09□□□□□ -1.59
PDLIM1O00151 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM1O00151 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM1O00151 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM1O00151 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
PDLIM1O00151 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM1O00151 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.09□□□□□ -1.59
PDLIM1O00151 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM1O00151 RNA5SP510-201ENST00000364697 99 ntBASIC5.09□□□□□ -1.59
PDLIM1O00151 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PDLIM1O00151 NENFP1-201ENST00000419476 466 ntBASIC5.09□□□□□ -1.59
PDLIM1O00151 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM1O00151 AL022331.1-201ENST00000429025 477 ntBASIC5.09□□□□□ -1.59
PDLIM1O00151 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM1O00151 SNRPFP2-201ENST00000440710 251 ntBASIC5.09□□□□□ -1.59
PDLIM1O00151 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PDLIM1O00151 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM1O00151 CYCSP34-201ENST00000458172 304 ntBASIC5.09□□□□□ -1.59
PDLIM1O00151 RPS23P6-201ENST00000466136 431 ntBASIC5.09□□□□□ -1.59
PDLIM1O00151 RN7SL583P-201ENST00000475692 287 ntBASIC5.09□□□□□ -1.59
PDLIM1O00151 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM1O00151 AC016687.1-201ENST00000482574 353 ntBASIC5.09□□□□□ -1.59
PDLIM1O00151 AC009120.1-201ENST00000493458 473 ntBASIC5.09□□□□□ -1.59
PDLIM1O00151 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM1O00151 AC021678.3-201ENST00000517893 476 ntBASIC5.09□□□□□ -1.59
PDLIM1O00151 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM1O00151 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
PDLIM1O00151 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM1O00151 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
PDLIM1O00151 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM1O00151 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM1O00151 AC015802.2-201ENST00000589690 189 ntBASIC5.09□□□□□ -1.59
PDLIM1O00151 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.09□□□□□ -1.59
PDLIM1O00151 AP002884.5-201ENST00000595053 1132 ntBASIC5.09□□□□□ -1.59
PDLIM1O00151 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM1O00151 AP000769.2-201ENST00000602344 396 ntBASIC5.09□□□□□ -1.59
PDLIM1O00151 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
PDLIM1O00151 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
PDLIM1O00151 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM1O00151 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM1O00151 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM1O00151 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
PDLIM1O00151 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PDLIM1O00151 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.08□□□□□ -1.6
PDLIM1O00151 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PDLIM1O00151 KPNA2P2-201ENST00000419546 1489 ntBASIC5.08□□□□□ -1.6
PDLIM1O00151 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM1O00151 MTND4P26-201ENST00000415971 1359 ntBASIC5.08□□□□□ -1.6
PDLIM1O00151 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM1O00151 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PDLIM1O00151 RNA5SP30-201ENST00000365552 115 ntBASIC5.08□□□□□ -1.6
PDLIM1O00151 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PDLIM1O00151 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PDLIM1O00151 LAP3P1-201ENST00000403648 294 ntBASIC5.08□□□□□ -1.6
PDLIM1O00151 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.08□□□□□ -1.6
PDLIM1O00151 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.08□□□□□ -1.6
PDLIM1O00151 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM1O00151 AC007161.1-204ENST00000423039 460 ntBASIC5.08□□□□□ -1.6
PDLIM1O00151 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.08□□□□□ -1.6
PDLIM1O00151 UBE2V2P3-201ENST00000433562 437 ntBASIC5.08□□□□□ -1.6
PDLIM1O00151 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.08□□□□□ -1.6
PDLIM1O00151 SUMO2P3-201ENST00000438311 288 ntBASIC5.08□□□□□ -1.6
PDLIM1O00151 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.08□□□□□ -1.6
PDLIM1O00151 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.08□□□□□ -1.6
PDLIM1O00151 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.08□□□□□ -1.6
PDLIM1O00151 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.08□□□□□ -1.6
PDLIM1O00151 AC016724.1-201ENST00000453215 421 ntBASIC5.08□□□□□ -1.6
PDLIM1O00151 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms