Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC188H7C350 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC188H7C350 AC006484.1-201ENST00000435086 1884 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 ZNF652P1-201ENST00000442420 1309 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC188H7C350 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC188H7C350 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC188H7C350 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC188H7C350 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC188H7C350 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC188H7C350 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC188H7C350 AP001642.1-201ENST00000624727 2117 ntBASIC5.44□□□□□ -1.54
CCDC188H7C350 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC188H7C350 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC188H7C350 AL035079.1-201ENST00000405210 287 ntBASIC5.44□□□□□ -1.54
CCDC188H7C350 AL390316.1-201ENST00000406279 553 ntBASIC5.44□□□□□ -1.54
CCDC188H7C350 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.44□□□□□ -1.54
CCDC188H7C350 Z93019.1-201ENST00000416450 973 ntBASIC5.44□□□□□ -1.54
CCDC188H7C350 AL662874.1-201ENST00000426065 230 ntBASIC5.44□□□□□ -1.54
CCDC188H7C350 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC188H7C350 AC069154.1-201ENST00000432914 542 ntBASIC5.44□□□□□ -1.54
CCDC188H7C350 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC188H7C350 AC118758.1-202ENST00000454719 225 ntBASIC5.44□□□□□ -1.54
CCDC188H7C350 SEPT7P3-201ENST00000455017 621 ntBASIC5.44□□□□□ -1.54
CCDC188H7C350 AP002345.1-201ENST00000456493 928 ntBASIC5.44□□□□□ -1.54
CCDC188H7C350 AC011476.1-201ENST00000466725 307 ntBASIC5.44□□□□□ -1.54
CCDC188H7C350 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC188H7C350 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC188H7C350 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC188H7C350 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC188H7C350 RN7SKP99-201ENST00000517028 307 ntBASIC5.44□□□□□ -1.54
CCDC188H7C350 AC067904.2-201ENST00000517322 1283 ntBASIC5.44□□□□□ -1.54
CCDC188H7C350 FTH1P11-201ENST00000517577 551 ntBASIC5.44□□□□□ -1.54
CCDC188H7C350 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC188H7C350 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC188H7C350 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC188H7C350 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC188H7C350 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCDC188H7C350 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC188H7C350 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCDC188H7C350 AC118658.2-201ENST00000618697 459 ntBASIC5.44□□□□□ -1.54
CCDC188H7C350 MIR6806-201ENST00000622141 64 ntBASIC5.44□□□□□ -1.54
CCDC188H7C350 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CCDC188H7C350 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC188H7C350 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC188H7C350 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
CCDC188H7C350 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCDC188H7C350 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.44□□□□□ -1.54
CCDC188H7C350 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC188H7C350 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC188H7C350 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC188H7C350 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC188H7C350 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC188H7C350 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC188H7C350 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC188H7C350 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC188H7C350 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC188H7C350 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC188H7C350 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC188H7C350 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC188H7C350 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC188H7C350 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC188H7C350 U3.32-201ENST00000408116 212 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 SNORA79B-201ENST00000410557 148 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 HMGN1P20-201ENST00000411849 300 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC188H7C350 AL356806.1-201ENST00000422524 916 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 AL445528.1-201ENST00000426330 420 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC188H7C350 RPL7AP61-201ENST00000443410 636 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.43□□□□□ -1.54
CCDC188H7C350 RNA5SP103-201ENST00000459503 118 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 AC107015.1-201ENST00000466902 747 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 RPL7P40-201ENST00000481703 745 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 AC005412.2-201ENST00000492004 341 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 AC090543.1-201ENST00000492168 485 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.43□□□□□ -1.54
CCDC188H7C350 AC090638.1-201ENST00000498296 909 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC188H7C350 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC188H7C350 RNU6-760P-201ENST00000516078 97 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC188H7C350 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC188H7C350 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC188H7C350 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC188H7C350 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC188H7C350 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC188H7C350 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.43□□□□□ -1.54
CCDC188H7C350 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.43□□□□□ -1.54
CCDC188H7C350 AGGF1P9-201ENST00000561884 913 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC188H7C350 BMS1P7-201ENST00000602440 1052 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 FO681491.1-202ENST00000623392 737 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 AC132068.1-201ENST00000623805 459 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 AC007683.2-201ENST00000624681 714 ntBASIC5.43□□□□□ -1.54
CCDC188H7C350 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC188H7C350 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC188H7C350 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC188H7C350 AC063976.2-201ENST00000425667 3556 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms