Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC004815.1-201ENST00000484185 331 ntBASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 RN7SL447P-201ENST00000494711 245 ntBASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 RPS17P5-201ENST00000498293 408 ntBASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 RNU6-889P-201ENST00000517189 103 ntBASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 AC026688.1-201ENST00000520639 1168 ntBASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 AC136777.2-201ENST00000522979 358 ntBASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 AL133247.2-201ENST00000603236 482 ntBASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 AC006363.1-201ENST00000603806 463 ntBASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 AC015712.7-201ENST00000615211 635 ntBASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 RNU6-368P-201ENST00000620928 107 ntBASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 RNU6-538P-201ENST00000622329 107 ntBASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 AC019080.5-201ENST00000624891 757 ntBASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 AC005618.4-201ENST00000625053 554 ntBASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 AC093591.2-201ENST00000565254 3843 ntBASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NPIPA3F8WFD2 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.96□□□□□ -1.61
NPIPA3F8WFD2 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.96□□□□□ -1.61
NPIPA3F8WFD2 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
NPIPA3F8WFD2 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 RNA5SP335-201ENST00000363817 110 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 RNU2-22P-201ENST00000411266 212 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AC007394.1-201ENST00000421941 531 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 RIMKLBP2-201ENST00000424737 654 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 RPL7P56-201ENST00000429441 717 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 FAM96AP1-201ENST00000430879 482 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 RPL12P18-201ENST00000437175 325 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 CNOT7P2-201ENST00000441051 832 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 LINC02210-201ENST00000444561 288 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 RPS26P41-201ENST00000450370 284 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AC005532.2-201ENST00000467154 373 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 RPS21P4-201ENST00000487122 248 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AC072052.1-201ENST00000496556 306 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 RPEP1-201ENST00000504507 658 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AC093763.2-201ENST00000505334 1223 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 COL6A4P2-205ENST00000509855 506 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 RN7SKP253-201ENST00000516424 309 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 BLZF2P-201ENST00000553776 1130 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AC079298.2-201ENST00000623885 459 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AP003499.2-201ENST00000624100 483 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AC112198.2-201ENST00000426589 6996 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 Z95331.1-201ENST00000623075 23112 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 AC007342.5-201ENST00000571340 2142 ntBASIC4.96□□□□□ -1.62
NPIPA3F8WFD2 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NPIPA3F8WFD2 LINC01963-201ENST00000562038 3148 ntBASIC4.95□□□□□ -1.62
NPIPA3F8WFD2 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.95□□□□□ -1.62
NPIPA3F8WFD2 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.95□□□□□ -1.62
NPIPA3F8WFD2 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.95□□□□□ -1.62
NPIPA3F8WFD2 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NPIPA3F8WFD2 AC140134.1-201ENST00000511830 3544 ntBASIC4.95□□□□□ -1.62
NPIPA3F8WFD2 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NPIPA3F8WFD2 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
NPIPA3F8WFD2 AC005294.1-201ENST00000355509 281 ntBASIC4.95□□□□□ -1.62
NPIPA3F8WFD2 SNORA58B-201ENST00000364259 136 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms